Table 1. C. militaris isolates used in this study and information on their mitochondrial genomes.
Isolate | Source | GenBank accession no. | Size (bp) | Introna |
No. introns | rns-cox3 IRa | Cladeb | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
cob-i1 | cox1-i1 | cox2-i1 | cox3-i1 | rnl-i1 | rnl-i2 | rnl-i3 | rnl-i4 | |||||||
V26-17 | Company | KP719097 | 29478 | + | + | + | + | 4 | + | A | ||||
V40-4 | Company | KP722512 | 27235 | + | + | 2 | + | B | ||||||
V40-5 | Company | KP722501 | 33967 | + | + | + | + | + | + | + | + | 8 | + | D |
CM09-9-24 | Liaoning, China | KP722496 | 28285 | + | + | + | 3 | + | C | |||||
CM09-31-28 | Liaoning, China | KP722513 | 27245 | + | + | 2 | + | B | ||||||
CM552 | Liaoning, China | KP722502 | 30662 | + | + | + | + | + | 5 | + | E | |||
CM01 | unknown | KP719096 | 31854 | + | + | + | + | + | + | 6 | + | F | ||
CM06 | unknown | KP722500 | 26535 | + | + | 2 | B | |||||||
F02 | unknown | KP722505 | 31854 | + | + | + | + | + | + | 6 | + | F | ||
CMB | unknown | KP722507 | 30026 | + | + | + | + | + | 5 | + | G | |||
EFCC-C2 | unknown | NC_022834 | 33277 | + | + | + | + | + | + | + | + | 8 | D |
a“+” Indicates the presence of an intron or the large rns-cox3 intergenic region (IR).
bThe clade here referred to those classified according to intron presence/absence patterns as depicted in our previous paper (Zhang et al. 2015).