Table S1.
List of primers used in the study
| Gene name | Primer sequence (5′–3′) | Coordinates/positions/size, bp | Notes |
| qPCR | |||
| BBX32 RT-F | TGTGTCTCAAGCTCCGAGCTATCG | — | — |
| BBX32 RT-R | TTTCCCTCCCTCGCGCTCTGTTTA | — | — |
| BBX32-AMI-F | GCGGATGGCATTTTTGTAA | — | — |
| BBX32-AMI-R | CGCCGCTAAGAACACTCTCT | — | — |
| LHY-F | ACCAACGAAACAGGTAAGTGGCG | — | — |
| LHY-R | GTGCACAGTAGTACCATCGTTACC | — | — |
| CCA1 -F | AATGTGACCGGTGGGTTCATGG | — | — |
| CCA1-R | AAGTGCATAGCACGCGCCTTAC | — | — |
| TOC1 -F | CTTCAATCTACTTTTCTTCGGTGCT | — | — |
| TOC1-R | AATAGTAATCCAGCGCAATTTTCTTC | — | — |
| CO-F | AACGACATAGGTAGTGGAGAGAACAAC | — | — |
| CO-R | GCAGAATCTGCATGGCAATACA | — | — |
| FT-F | CAACCCTCACCTCCGAGAATAT | — | — |
| FT-R | TGCCAAAGGTTGTTCCAGTGT | — | — |
| IPP2-F | GTATGAGTTGCTTCTCCAGCAAAG | — | — |
| IPP2-R | GAGGATGGCTGCAACAAGTGT | — | — |
| COL3-F | TACCGTTGGTGCCTGAAAGTGG | — | — |
| COL3-R | ATAACTGCACAGCTGGCGTCTC | — | — |
| Y1.5H | |||
| FT.FR1.1.E-F | CACCCTTATTTTTATTAATAATCTTAC | −508 /−4 | TOPO cloning primer |
| FT.FR1.1-R | CTTTGATCTTGAACAAACAGG | ||
| FT.FR2.1.E-F | CACCGAAGAGAAATAAAACAATTGATTTGG | −975/−493 | TOPO cloning primer |
| FT.FR2.1-R | TATTAATAAAAATAAGAAAAAAGTAGGG | ||
| FT.FR3.1.E-F | CACCCTGAGATGTTACAAA | −1468/−956 | TOPO cloning primer |
| FT.FR3.1-R | CAATTGTTTTATTTCTCTTCTTTTTTTA | ||
| FT.FR4.1.E-F | CACCCAAAAAGATACACTTTT | −1960/−1461 | TOPO cloning primer |
| FT.FR4.1-R | CATCTCAGTAATGTATTCATATTG | ||
| FT.FR5.1.E-F | CACCCGAACATTATGCGA | −2451/−1948 | TOPO cloning primer |
| FT.FR5.1-R | GTGTATCTTTTTGTTTTTTGATTTAAT | ||
| FT.FR6.1.E-F | CACCGTGATGCACTATATG | −2571/−2366 | TOPO cloning primer |
| FT.FR6.1-R | GTTTTGTCTTTATCAACTCCAC | ||
| ChIP | |||
| FT-Amp5-F | CATGCGAAAATCTAGTGGAAGAAA | −2537/−2514 | — |
| FT-Amp5-R | AAGCCGTGATGTTCCTAAACAC | −2335/−2314 | — |
| FT-Amp4-F | GCGACTGCGACCTATTTTTTTC | −1860/−1839 | — |
| FT-Amp4-R | GCTATATGCACTTTTTAACGACTAGC | −1692/−1667 | — |
| FT-Amp3-F | CCTACAGTTGTTAGGCTATGGT | −1354/−1333 | — |
| FT-Amp3-R | CTAACCATCCATTTGCACGAC | −1179/−1159 | — |
| FT-Amp2-F | GACTATTCTCAAATGTCCTGGTTC | −782/−759 | — |
| FT-Amp2-R | GGTACCGCCAAGTTTATAGAGA | −540/−519 | — |
| FT-Amp1-F | GTGTATTAGTGTGGTGGGTT | −297/−278 | — |
| FT-Amp1-R | TGATCTTGAACAAACAGGTG | −26/−7 | — |
| C1-F | GAGACCCTCTTATAGTAAGCAGA | — | Locus related control |
| C1-R | GTATAGAAGTTCCTGAGGTCTTC | — | Locus related control |
| C2-F | TTCTTTTTTCATGAAGATGGACCC | — | Locus related control |
| C2-R | GAACATCAATTTTCTATATCTTTTTGCAG | — | Locus related control |
| UBQ10-F/E-F | TCCAGGACAAGGAGGTATTCCTCCG | — | Locus unrelated control |
| UBQ10-R/E-R | CCACCAAAGTTTTACATGAAACGAA | — | Locus unrelated control |
| Cloning | |||
| BBX32-F | CACCTGTGTCTCAAGCTCCGAGCTATCG | — | TOPO cloning primer |
| BBX32-R | TAAACAGAGCGCGAGGGAGGGAAA | — | Full-length cDNA |
| COL3-F | CACCATGGCGTCGTCGTCAAGACTTTGCG | — | TOPO cloning primer |
| COL3-R | TCAGAAACTCGGAACAACACCG | — | Full-length cDNA |
| Reverse COL3 N-term +Stop | TCAACCGCCATCTTCATCTAC | — | — |
| Reverse COL3 C-term | TCAGAAACTCGGAACAACACCG | — | — |
| BBX32 N term -F | CACCATGGTGAGCTTTTGCGAG | — | TOPO cloning primer |