Table 3. Genes selected as top candidates from mRNA expression data. The table shows the top 1% of genes up-regulated in vivo (top) and in vitro (bottom).
| In vivo, genes with fold-change values | |||||
| HBA-A1 | 12.10 | LOC671894///LOC674 | 7.75 | MYOM2 | 7.03 |
| S100A9 | 11.93 | RTP4 | 7.63 | MX1 | 7.01 |
| S100A8 | 10.92 | MS4A1 | 7.61 | TIAM1 | 7.00 |
| IIGP1 | 9.91 | 4732416N19RIK | 7.57 | D430019H16RIK | 6.97 |
| RHOJ | 9.80 | 2900041A09RIK | 7.56 | DOCK9///LOC670309 | 6.96 |
| NKG7 | 9.76 | CASP4 | 7.55 | SPARC | 6.96 |
| AQP1 | 9.75 | IFITM3 | 7.53 | FPR-RS2 | 6.93 |
| ANXA2 | 9.64 | SLFN4 | 7.53 | PLF///PLF2///MRP | 6.91 |
| CSF1R | 8.94 | 5830431A10RIK | 7.49 | MYH6///LOC671894/ | 6.81 |
| IL18 | 8.85 | ZBP1 | 7.44 | CCL3 | 6.75 |
| NRP1 | 8.68 | B230343A10RIK | 7.41 | S100A5 | 6.73 |
| FOS | 8.52 | CCL5 | 7.37 | TIMM8A2 | 6.72 |
| SAA3P | 8.47 | 4921525O09RIK | 7.36 | LGMN | 6.69 |
| CHI3L3 | 8.45 | C5AR1 | 7.33 | DLGH3 | 6.65 |
| TCRB-J///TCRB-V13 | 8.29 | C1QB | 7.30 | ITGA5 | 6.65 |
| LOC240327 | 8.27 | HTRA3 | 7.28 | KLK3 | 6.64 |
| IGL-V1///2010309G2 | 8.26 | LAMB2 | 7.26 | LGALS3BP | 6.64 |
| ENPP3 | 8.24 | PLXNB1 | 7.25 | CD97 | 6.63 |
| PGLYRP1 | 8.19 | IL2RA | 7.24 | DIRAS2 | 6.60 |
| SLC9A3R2 | 8.11 | A330102K04RIK | 7.19 | KLF4 | 6.55 |
| LCN2 | 8.00 | GPRC5A | 7.16 | GZMA | 6.52 |
| BLR1 | 7.90 | TCRB-V13///LOC6655 | 7.12 | 2010300C02RIK///LO | 6.51 |
| HYDIN | 7.89 | TYROBP | 7.10 | ADCY6 | 6.51 |
| EPPK1 | 7.88 | 1100001G20RIK | 7.05 | A930013B10RIK | 6.49 |
| NGP | 7.82 | LMNA | 7.04 | TLR1 | 6.48 |
| MPA2L///LOC626578 | 7.80 | XDH | 7.04 | ||
| In vitro, genes with fold-changes | |||||
| TGFB3 | –9.74 | IL21R | –4.82 | 5730442G03RIK | –3.78 |
| HBB-BH1 | –8.50 | BEX6 | –4.57 | 1700025G04RIK | –3.77 |
| VLDLR | –7.05 | 1190002F15RIK | –4.39 | B230107K20RIK | –3.77 |
| HS3ST1 | –6.99 | FETUB | –4.34 | JDP2 | –3.77 |
| PLA2G2F | –6.02 | NUPR1 | –4.33 | NETO2 | –3.76 |
| 1700097N02RIK | –5.97 | REEP1 | –4.29 | PRG3 | –3.69 |
| NKX1-2 | –5.77 | GLRP1 | –4.25 | RTN4RL2 | –3.57 |
| ACTR3B | –5.69 | SENP8 | –4.17 | SLC6A13 | –3.57 |
| PPP1R3B | –5.52 | CCR2 | –4.15 | D19ERTD652E | –3.53 |
| UBQLN2 | –5.49 | PAX7 | –4.13 | ORC1L | –3.51 |
| ANKRD15 | –5.42 | POLH | –4.10 | CD248 | –3.51 |
| SOX6 | –5.38 | 2610019I03RIK | –4.05 | DPM3 | –3.48 |
| CDH1 | –5.37 | FADS2 | –4.03 | GM129 | –3.48 |
| 1810011H11RIK | –5.35 | DKK3 | –3.99 | USP2 | –3.48 |
| CD28 | –5.20 | PKP2 | –3.95 | EVA1 | –3.45 |
| LOC433844 | –5.13 | AXIN2 | –3.92 | ABCG1 | –3.44 |
| AI427515 | –5.09 | KIF2C///LOC631653 | –3.88 | AMMECR1 | –3.43 |
| ART4 | –5.01 | NAP1L3 | –3.84 | CMAH | –3.42 |
| PTGS1 | –4.95 | 2610021K21RIK | –3.83 | PLK1 | –3.40 |
| GFI1B | –4.95 | BARD1 | –3.83 | ZDHHC2 | –3.39 |
| SELENBP1 | –4.93 | CHAC1 | –3.80 | GCM2 | –3.39 |
| CTH | –4.93 | 4731417B20RIK | –3.79 | MAP6 | –3.38 |