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. 2016 Oct 28;425(1):59–75. doi: 10.1007/s11010-016-2862-3

Table 2.

Summary of the experimental design applied to analyze gene expression by microarray and qPCR

Type of cells Transfected vector Treatment
HepaRG undifferentiated Negative control DMSO
HepaRG undifferentiated Negative control BNF
HepaRG undifferentiated AhR() DMSO
HepaRG undifferentiated AhR(−) BNF
HepaRG differentiated Negative control DMSO
HepaRG differentiated Negative control BNF
HepaRG differentiated AhR() DMSO
HepaRG differentiated AhR(−) BNF

The negative control shRNA is a scrambled artificial sequence which does not match any human gene. The AhR(−) shRNA is a sequence which decreases the expression of AhR mRNA by RNA interference. Specimens in italic were analyzed only by qPCR