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. Author manuscript; available in PMC: 2017 Mar 1.
Published in final edited form as: Neuroimage. 2015 Dec 31;128:193–208. doi: 10.1016/j.neuroimage.2015.12.041

Table 2.

Overview of algorithms and MRI data used for the segmentation of each model compartment. Additionally, the conductivities used for FEM simulations and references for these values are given.

Compartment Segmentation MRI data Conductivity (σ = S/m) References
White matter FAST MPRAGE 0.1429 Haueisen et al. (1995)
Gray matter FAST MPRAGE 0.3333 Haueisen et al. (1995)
Liquor FAST MPRAGE 1.5385 Haueisen et al. (1995)
Blood vessels Frangi filtering + regional growth MPRAGE+GE 0.6250 (high-σ)
0.02 (intermediate-σ)
0.0063 (low-σ)
See Volume conductor head models section
Dura Masking GE 0.0650 Manola et al. (2005)
Compact bone BET2 GE 0.0063 Haueisen et al. (1995)
Fat Thresholding MPRAGE 0.0400 Haueisen et al. (1995)
Eye Regional growth MPRAGE 0.5051 Haueisen et al. (1995)
Soft tissue Regional growth Binary 0.1736 Haueisen et al. (1995)
Internal air Regional growth MPRAGE 0.0020 Haueisen et al. (1995)
Skin Isosurface Binary 0.4348 Haueisen et al. (1995)