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. 2017 Jan 11;18:69. doi: 10.1186/s12864-016-3459-7

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Comparison of estimates of genetic diversity derived from cross-species (developed for Arabidopsis thaliana) and species-specific microsatellite markers (developed for Arabidopsis halleri) for a allelic richness (A _r, p < 0.0001, paired t-test) and b expected microsatellite heterozygosity (SSR-H _e, p < 0.0001, paired t-test). c Estimates of SSR-H _e inferred separately from cross-species and species-specific microsatellite markers were not significantly correlated (Pearson’s r = 0.439, p = 0.237). Dots are labelled with population codes (Additional file 1: Table S1). d No significantly different estimates of H _e were observed among populations after Bonferroni correction (pairwise Wilcoxon signed-rank test). Without correction for multiple testing only population Aha11 and AhaN3 showed significantly different estimates of H _e (indicated with different colouring and letters)