Table 2.

Summary of 2-year QTL information for powdery mildew resistance identified on LGs 2 and 15 for linkage maps of GE0711/1009 (N = 147) and GE1025 (N = 125), as well as the consensus map (N = 272)

LG	Map	Year	Analysis	LOD threshold		LODmax	LODmax position (cM)	Variance explained (%)	Confidence interval (cM) [LODmax − 2]
				LG-specifica	Genome-widea
2	GE0711/1009	2014	IM	1.60	3.10	3.46	82.2	11.7	67.8–97.4
			CIM	–	3.68	3.49	83.0	10.1	77.0–86.1
		2015	IM	1.50	2.90	4.21	79.0	13.3	71.2–94.5
			CIM	–	3.73	5.38	79.0	13.3	74.8–84.0
	GE1025	2014	IM	4.10	4.10	–	–	–	–
			CIM	–	4.00	–	–	–	–
		2015	IM	6.50	6.50	–	–	–	–
			CIM	–	4.75	–	–	–	–
	Consensus	2014	IM	1.80	3.20	–	–	–	–
			CIM	–	3.54	–	–	–	–
		2015	IM	1.90	3.30	4.19	79.6	7.2	67.1–90.2
			CIM	–	3.58	3.91	74.8	7.0	69.0–78.0
15	GE0711/1009	2014	IM	1.60	3.10	5.58	7.2	17.3	0.0–58.5
			CIM	–	3.68	6.79	10.0	16.1	2.0–11.0
		2015	IM	1.60	2.90	–	–	–	–
			CIM	–	3.73	–	–	–	–
	GE1025	2014	IM	1.80	4.10	6.32	16.9	21.4	2.0–27.9
			CIM	–	4.00	8.08	16.9	20.1	12.0–21.2
		2015	IM	1.70	6.50	9.08	5.5	29.4	1.0–29.5
			CIM	–	4.75	10.30	14.0	28.5	9.0–18.0
	Consensus	2014	IM	1.60	3.20	10.21	18.5	17.1	5.0–24.4
			CIM	–	3.54	10.57	19.4	16.0	12.0–21.2
		2015	IM	1.70	3.30	9.11	16.5	15.7	2.0–37.2
			CIM	–	3.58	9.83	18.0	15.0	15.0–24.0
	GE1025 (AUDPC)	2014	IM	1.70	3.90	7.59	5.54	25.6	2.0–46.4
			CIM	–	4.14	6.96	13.2	23.6	5.5–15.0
		2015	IM	1.80	3.50	8.23	5.54	27.0	0.0–51.4
			CIM	–	4.04	8.21	5.54	27.0	1.0–10.5

^aEstimated threshold values using a permutation test with 1000 permutations at α = 0.05