Table 2. List of genes in the chloroplast genome of Hagenia abyssinica.
| Category | Gene type | Gene | ||||||
|---|---|---|---|---|---|---|---|---|
| Self-replication | Ribosomal RNA | rrn16 | rrn23 | rrn4.5 | rrn5 | |||
| Transfer RNA | trnA-UGC* | trnfM-CAU | trnI-GAU* | trnM-CAU | trnR-ACG | trnS-UGA | ||
| trnC-GCA | trnG-GCC* | trnK-UUU* | trnN-GUU | trnW-CCA | trnT-GGU | |||
| trnD-GUC | trnG-UCC | trnL-CAA | trnY-GUA | trnR-UCU | trnT-UGU | |||
| trnE-UUC | trnH-GUG | trnL-UAA* | trnP-UGG | trnS-GCU | trnV-GAC | |||
| trnF-GAA | trnI-CAU | trnL-UAG | trnQ-UUG | trnS-GGA | trnV-UAC* | |||
| Small ribosomal units | rps11 | rps12 | rps14 | rps15 | rps16* | rps18 | ||
| rps19 | rps2 | rps3 | rps4 | rps7 | rps8 | |||
| Large ribosomal units | rpl14 | rpl16 | rpl2* | rpl20 | rpl22 | rpl23 | rpl32 | |
| rpl33 | rpl36 | |||||||
| RNA polymerase sub-units | rpoA | rpoB | rpoC1* | rpoC2 | ||||
| Photosynthesis genes | NADH dehydrogenase | ndhA* | NdhB* | ndhC | ndhD | ndhE | ndhF | |
| ndhG | ndhH | ndhI | ndhJ | ndhK | ||||
| Photosystem I | psaA | psaB | psaC | psaI | psaJ | ycf3** | ycf4 | |
| Photosystem II | psbA | psbB | psbC | psbD | psbE | psbF | psbH | |
| psbI | psbJ | psbK | psbL | psbM | psbN | psbT | ||
| lbhA | ||||||||
| Cytochrome b/f complex | petA | petB | petD | petG | petL | petN | ||
| ATP synthase | atpA | atpB | atpE | atpF | atpH | atpI | ||
| Large subunit of rubisco | rbcL | |||||||
| Other genes | Maturase | matK | ||||||
| Protease | clpP** | |||||||
| Acetyl-CoA-carboxylase sub-unit | accD | |||||||
| Envelope membrane protein | cemA | |||||||
| Component of TIC complex | ycf1 | |||||||
| c-type cytochrome synthesis | ccsA | |||||||
| Unknown | hypothetical genes reading frames | ycf2 | ||||||
Notes.
*
Genes with a single intron.
**
Genes with two introns.