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. 2017 Jan 12;12(1):e0169918. doi: 10.1371/journal.pone.0169918

Fig 2. T1D collective inference p-values and epigenetic activity distribution.

Fig 2

SNPs (“proxies”) were selected based on their independent-SNP pi values (middle, open bars). The top (triangular) and middle (bar graph) panels show the interaction and (additive) single-SNP contributions, respectively. Bottom panel shows the mean frequencies (averaged over groups of all known SNPs in high LD to each proxy) of epigenetically active states within the 111 Roadmap reference epigenomes.