TABLE 1.
Oligonucleotide PCR primers and TaqMan internal probes for C. burnetii genes
| Gene | Designation | Gene primer sequences (5′-3′) | Gene probe sequence (5′-3′) |
|---|---|---|---|
| rrs | Q16s-F | CCATGAAGTTGGAATCGCTAG | CGGTGAATACGTTCTCGGGCCTTGTAC |
| Q16s-R | ACTCCCATGGTGTGACGG | ||
| gltA | QgltA-F | CCGGTTCTACGGGAGCAAA | CCGTTTGCTTGTATTTCGGCGGG |
| QgltA-R | GGGCCCCAGAGAGCACTAAT | ||
| CBU0311 | Qp1-F | CGGCGATTGGCGTTTC | AACTGTTCAAAATCCGAAACGAGTCGCA |
| Qp1-R | GGTTGCGGTAATGCCGTTAA | ||
| rpoS | QrpoS-F | CGCGTTCGTCAAATCCAAATA | ACGCTCTGCAGCAATTACGCCA |
| QrpoS-R | GACGCCTTCCATTTCCAAAA | ||
| dotA | QdotA-F | GCGCAATACGCTCAATCACA | CCGGAGATACCGGCGGTGGG |
| QdotA-R | CCATGGCCCCAATTCTCTT | ||
| enhC | QenhC-F | TTTGATCTAACCGTCC CTGCTT | TCCTTTTGAAATGCCGCCTGGAGCT |
| QenhC-R | CTCGGGAGAGGGATTGAAAAG | ||
| hcbA | QhcbA-F | AGCTAAAGCGAAGAAAGATGCAA | CCGTAAACTTGCTAAACTTCGAAAAGAGGCC |
| QhcbA-R | TGGCAGCAGCTACTTTTCGA | ||
| scvA | QscvA-F | TGGAAAGACAAAATGTCCAACAA | ACGTGGAAAAGACCAACG |
| QscvA-R | GGTTAGAAGCACCCGGTCGT |