Table 1. Primers used for amplification of the target and constitutive control genes, and honey bee viruses.
Target | Designation | Forward (F) and reverse (R) primers (5’–3’) | Product length | Source |
---|---|---|---|---|
Defensin-1 | AmDef-1* | F: TGCGCTGCTAACTGTCTCAG | 119 bp | Evans [25] |
R: AATGGCACTTAACCGAAACG | ||||
Hymenoptaecin | AmHym* | F: CTCTTCTGTGCCGTTGCATA | 200 bp | Evans [25] |
R: GCGTCTCCTGTCATTCCATT | ||||
Poly-U-binding factor 68 kDa | AmPuf68* | F: CAAGACCTCCAACTAGCATG | 201 bp | Hamiduzzaman et al. [18] |
R: CAACAGGTGGTGGTGGTG | ||||
Vitellogenin | AmVit2* | F: ACGACTCGACCAACGACTT | 494 bp | Guidugli et al. [26] |
R: ACGAAAGGAACGGTCAATTCC | ||||
Ribosomal Protein S5 | RpS5** | F: AATTATTTGGTCGCTGGAATTG | 115 bp | Thompson et al. [24] |
R: TAACGTCCAGCAGAATGTGGTA | ||||
Glyceraldehyde 3-phosphate dehydrogenase2 | GAPD2** | F: GATGCACCCATGTTTGTTTG | 203 bp | Thompson et al. [24] |
R: TTTGCAGAAGGTGCATCAAC | ||||
Deformed Wing Virus | DWV*** | F: ATCAGCGCTTAGTGGAGGAA | 642 bp | Hamiduzzaman et al. [28] |
R: ATAGATATCAGTCAACGGAGC | ||||
Black Queen Cell Virus | BQCV*** | F: GTCAGCTCCCACTACCTTAAAC | 698 bp | Hamiduzzaman et al. [28] |
R: AACAAGAAGAAACGTAAACCAC | ||||
Israeli Acute Paralysis Virus | IAPV*** | F: AGACACCAATCACGGACCTCAC | 138 bp | Maori et al. [40] |
R: GAGATTGTTTGAGAGGGGTGG | ||||
Sac Brood Virus | SBV*** | F: GGATGAAAGGAAATTACCAG | 426 bp | Tentcheva et al. [41] |
R: CCACTAGGTGATCCACACT | ||||
Kashmir Bee Virus | KBV*** | F: GATGAACGTCGACCTATTGA | 414 bp | Stoltz et al. [42] |
R: TGTGGGTTGGCTATGAGTCA | ||||
Acute Bee paralysis Virus | ABPV*** | F: CCCAACGCACAAACAAATA | 516 bp | Fedorova et al. [43] |
R: CTCCAGACAACAACAACAA |
* Honey bee gene
** Constitutive honey bee control
*** Honey bee virus.