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. 2017 Jan 13;7:40688. doi: 10.1038/srep40688

Table 1. Enriched functional clusters, for genes associated with R 2 > 0.5.

Category Term Count % P Value
Cluster 1 Enrichment Score: 1.405 Calcium-binding domain    
INTERPRO IPR018247:EF-HAND 1 6 2.098 0.035
INTERPRO IPR018249:EF-HAND 2 6 2.098 0.038
INTERPRO IPR011992:EF-Hand type 6 2.098 0.045
Cluster 2 Enrichment Score: 1.372 Cysteine-type activity    
GOTERM_MF_FAT GO:0004198 ~ calcium-dependent cysteine-type endopeptidase activity 3 1.049 0.011
GOTERM_MF_FAT GO:0008234 ~ cysteine-type peptidase activity 4 1.399 0.066
GOTERM_MF_FAT GO:0004197 ~ cysteine-type endopeptidase activity 3 1.049 0.106
Cluster 3 Enrichment Score: 0.897 Cytochrome    
PIR_SUPERFAMILY PIRSF000045:cytochrome P450 CYP2D6 3 1.049 0.013
INTERPRO IPR002401:Cytochrome P450, E-class, group I 3 1.049 0.068
INTERPRO IPR017973:Cytochrome P450, C-terminal region 3 1.049 0.080
INTERPRO IPR017972:Cytochrome P450, conserved site 3 1.049 0.084
SP_PIR_KEYWORDS heme 4 1.399 0.091
INTERPRO IPR001128:Cytochrome P450 3 1.049 0.107
SP_PIR_KEYWORDS Monooxygenase 3 1.049 0.124
COG_ONTOLOGY Secondary metabolites biosynthesis, transport, and catabolism 3 1.049 0.148
GOTERM_MF_FAT GO:0020037 ~ heme binding 4 1.399 0.159
GOTERM_MF_FAT GO:0046906 ~ tetrapyrrole binding 4 1.399 0.176
GOTERM_MF_FAT GO:0009055 ~ electron carrier activity 4 1.399 0.301
SP_PIR_KEYWORDS iron 4 1.399 0.399
GOTERM_MF_FAT GO:0005506 ~ iron ion binding 4 1.399 0.614
Cluster 4 Enrichment Score: 0.860 Signaling    
UP_SEQ_FEATURE signal peptide 19 6.643 0.048
SP_PIR_KEYWORDS signal 19 6.643 0.111
SP_PIR_KEYWORDS glycoprotein 16 5.594 0.492
Cluster 5 Enrichment Score: 0.833 Sexual development    
GOTERM_BP_FAT GO:0045137 ~ development of primary sexual characteristics 3 1.049 0.117
GOTERM_BP_FAT GO:0003006 ~ reproductive developmental process 4 1.399 0.151
GOTERM_BP_FAT GO:0007548 ~ sex differentiation 3 1.049 0.180
Cluster 6 Enrichment Score: 0.760 Ion binding    
GOTERM_MF_FAT GO:0043167 ~ ion binding 40 13.986 0.130
GOTERM_MF_FAT GO:0046872 ~ metal ion binding 38 13.287 0.190
GOTERM_MF_FAT GO:0043169 ~ cation binding 38 13.287 0.213
Cluster 7 Enrichment Score: 0.725 Respiratory development    
GOTERM_BP_FAT GO:0030324 ~ lung development 3 1.049 0.145
GOTERM_BP_FAT GO:0030323 ~ respiratory tube development 3 1.049 0.145
GOTERM_BP_FAT GO:0060541 ~ respiratory system development 3 1.049 0.150
GOTERM_BP_FAT GO:0035295 ~ tube development 3 1.049 0.400
Cluster 8 Enrichment Score: 0.723 Protease activity    
GOTERM_MF_FAT GO:0004175 ~ endopeptidase activity 8 2.797 0.129
GOTERM_MF_FAT GO:0070011 ~ peptidase activity, acting on L-amino acid peptides 9 3.147 0.190
GOTERM_MF_FAT GO:0008233 ~ peptidase activity 9 3.147 0.215
GOTERM_BP_FAT GO:0006508 ~ proteolysis 12 4.196 0.242
Cluster 9 Enrichment Score: 0.703 Calcium-binding domain    
UP_SEQ_FEATURE calcium-binding region:2 3 1.049 0.126
INTERPRO IPR002048:Calcium-binding EF-hand 4 1.399 0.148
UP_SEQ_FEATURE calcium-binding region:1 3 1.049 0.157
SMART SM00054:EFh 4 1.399 0.187
UP_SEQ_FEATURE domain:EF-hand 1 3 1.049 0.258
UP_SEQ_FEATURE domain:EF-hand 2 3 1.049 0.258
INTERPRO IPR018248:EF hand 3 1.049 0.333
Cluster 10 Enrichment Score: 0.668 Embryonic development    
GOTERM_BP_FAT GO:0001824 ~ blastocyst development 3 1.049 0.082
GOTERM_BP_FAT GO:0001701 ~ in utero embryonic development 4 1.399 0.165
GOTERM_BP_FAT GO:0043009 ~ chordate embryonic development 4 1.399 0.397
GOTERM_BP_FAT GO:0009792 ~ embryonic development ending in birth or egg hatching 4 1.399 0.400
Cluster 11 Enrichment Score: 0.565 Cardiomyopathy    
KEGG_PATHWAY bta05412:Arrhythmogenic right ventricular cardiomyopathy (ARVC) 3 1.049 0.240
KEGG_PATHWAY bta05410:Hypertrophic cardiomyopathy (HCM) 3 1.049 0.277
KEGG_PATHWAY bta05414:Dilated cardiomyopathy 3 1.049 0.304
Cluster 12 Enrichment Score: 0.519 Phosphorylation    
GOTERM_MF_FAT GO:0004672 ~ protein kinase activity 9 3.147 0.213
GOTERM_BP_FAT GO:0006468 ~ protein amino acid phosphorylation 9 3.147 0.291
GOTERM_BP_FAT GO:0016310 ~ phosphorylation 9 3.147 0.447