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. 2017 Jan 13;17:26. doi: 10.1186/s12872-016-0456-3

Table 3.

Genotype and allele frequencies of atherosclerotic gene variants in the study population

SNP Genotypes Controls (n = 34) Patients (n = 23) P values Crude OR (95% CI) Adjusted OR (95% CI)
FGB Normal 22 (64.7) 12 (52.2) 0.636 1.0 1.0
-455G > A Hetero 10 (29.4) 9 (39.1) 1.6 (0.5–5.2) 0.28 (0.02–3.1)
Homo 2 (5.9) 2 (8.7) 1.8 (0.2–14.7) 1.65 (0.1–20.2)
Dominant model 12 (35.3) 11 (47.8) 1.6 (0.5–4.9)
p HWE 0.557 0.866
MAF (A) 0.21 0.28 0.344 1.5 (0.6–3.6)
HPA-1 a/a 26 (76.5) 13 (56.5) 0.112 1.0 1.0
a/b a/b 8 (23.5) 8 (34.8) 2.0 (0.6–6.5)
b/b 0 (0.0) 2 (8.7) 9.8 (0.4–21.9) 4.0 (1.4–6.4)
Dominant model 8 (23.5) 10 (43.5) 2.5 (0.7–7.8)
p HWE 0.436 0.638
MAF (b) 0.12 0.26 0.048 2.6 (0.9–7.1)
ACE I/I 6 (17.6) 2 (8.7) <0.001 1.0 1.0
I/D I/D 26 (76.5) 9 (39.1) 1.0 (0.1–6.1) 2.79 (0.3–29.7)
D/D 2 (5.9) 12 (52.2) 18 (2.0–161) 88.3 (4.3–179)
Dominant model 28 (82.4) 21 (91.3) 2.3 (0.4–12.2)
p HWE 0.001 0.866
MAF (D) 0.44 0.72 0.003 3.2 (1.4–7.1)
ApoB Normal 34 (100) 23 (100) NA NA
R3500Q p HWE NA NA
ApoE E2/E2 0 (0.0) 1 (4.3) 0.009 1.0
E2/E3/E4 E2/E4 2 (5.9) 1 (4.3) 0.2 (0.0–8.8)
E2/E3 20 (58.8) 3 (13.0) 0.05 (0.0–1.6)
E3/E3 10 (29.4) 15 (65.2) 0.4 (0.01–13.2)
E3/E4 2 (5.9) 3 (13.0) 0.4 (0.01–16.8)
p HWEa 0.060 0.550
E3 0.61 0.78 0.004 1.0
E2 0.32 0.13 0.08 (0.04–0.18)
E4 (MAF) 0.06 0.09 0.61 (0.2–1.87)

FGB fibrinogen beta polypeptide chain, HPA-1 human platelet antigen 1, ACE angiotensin converting enzyme, ApoB Apolipoprotein B-100, ApoE apolipotprotein E, aThe number of degrees of freedom for the chi-square is equal to 3 for three allele systems and 1 for two allele systems. MAF minor allele frequency. Fisher’s Exact and Chi-square tests were used. Adjusted OR by potential confounders (gender, age, BMI, FH, DM, obesity). Bold values indicate statistically significant at p < 0.05