Table 2.
Relative abundances of bacterial phyla in colonic mucosa samples.
| Phylum | Groups | Mean percentage of sequence in total bacterial population | SEM |
|---|---|---|---|
| Unclassified | Control | 0.122989 | 0.050167 |
| CST | 0.291527 | 0.19307 | |
| Acidobacteria | Control | 0.025735 | 0.010402 |
| CST | 0.033388 | 0.00685 | |
| Actinobacteria | Control | 0.095085 | 0.095085 |
| CST | 0.072405 | 0.031928 | |
| Armatimonadetes | Control | 0 | 0 |
| CST | 0.000879 | 0.000879 | |
| Bacteroidetes | Control | 8.06612 | 5.42359 |
| CST | 21.0435 | 6.556034 | |
| Chlamydiae | Control | 0 | 0 |
| CST | 0.00306 | 0.002007 | |
| Chlorobi | Control | 0 | 0 |
| CST | 0.002098 | 0.002098 | |
| Cyanobacteria | Control | 0.039247 | 0.022309 |
| CST | 0.175241 | 0.063441 | |
| Deferribacteres | Control | 6.923494 | 3.656936 |
| CST | 5.949701 | 2.168418 | |
| Fibrobacteres | Control | 0 | 0 |
| CST | 0.013779 | 0.012973 | |
| Firmicutes | Control | 10.13424 | 6.855156 |
| CST | 12.51866 | 5.161134 | |
| Lentisphaerae | Control | 0 | 0 |
| CST | 0.00457 | 0.00457 | |
| OD1 | Control | 0 | 0 |
| CST | 0.004988 | 0.00332 | |
| OP3 | Control | 0 | 0 |
| CST | 0.001604 | 0.001604 | |
| Planctomycetes | Control | 0.002067 | 0.002067 |
| CST | 0.004664 | 0.001662 | |
| Proteobacteria | Control | 72.02106 | 16.32041 |
| CST | 59.16764 | 11.01085 | |
| Spirochaetes | Control | 0 | 0 |
| CST | 0.082258 | 0.082258 | |
| TM7 | Control | 0 | 0 |
| CST | 0.007409 | 0.00482 | |
| Tenericutes | Control | 0.037096 | 0.019253 |
| CST | 0.371448 | 0.170574 | |
| Verrucomicrobia | Control | 2.532872 | 2.52412 |
| CST | 0.142801 | 0.117295 |