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. 2016 Jun 3;30(9):1844–1852. doi: 10.1038/leu.2016.90

Table 2. The BCR-ABL1 secondary reference panel was highly concordant with the WHO panel.

Reference gene RT-ddPCR IS CF WHO panel
Secondary panel
    Panel member Mean empirical %BCR-ABL1 Nominal %BCR-ABL1IS Panel member Mean empirical %BCR-ABL1 Assigned %BCR-ABL1IS
(a) Empirical and %BCR-ABLIS values
 ABL1 0.93 4 (08/198) 11.2250 10.7469 A 13.7178 12.7575
    3 (08/196) 1.2540 1.1672 B 1.2841 1.1942
    2 (08/194) 0.1260 0.1112 C 0.1095 0.1019
    1 (08/192) 0.0130 0.0118 D 0.0116 0.0108
          E 0.0041 0.0038
 BCR 1.85 4 (08/198) 9.8135 16.3129 A 11.5502 21.3678
    3 (08/196) 0.8441 1.6627 B 0.7300 1.3505
    2 (08/194) 0.0988 0.1753 C 0.0759 0.1404
    1 (08/192) 0.0098 0.0195 D 0.0081 0.0150
          E 0.0027 0.0050
 GUSB 1.28 4 (08/198) 6.5834 10.1235 A 9.1800 11.7504
    3 (08/196) 0.5924 0.8295 B 0.6219 0.7960
    2 (08/194) 0.0677 0.0749 C 0.0628 0.0804
    1 (08/192) 0.0065 0.0071 D 0.0068 0.0087
          E 0.0023 0.0029
Reference gene WHO panel
Secondary panel
  Panel member Mean copy number per ng RNA Panel member Mean copy number per ng RNA
(b) Copy numbers of BCR-ABL1, ABL1, BCR and GUSB per ng of RNA
 BCR-ABL1 4 (08/198) 92.98 A 103.27
  3 (08/196) 9.75 B 8.56
  2 (08/194) 0.99 C 0.72
  1 (08/192) 0.10 D 0.08
      E 0.03
 ABL1 4 (08/198) 831.74 A 754.55
  3 (08/196) 778.56 B 665.80
  2 (08/194) 784.95 C 651.95
  1 (08/192) 785.90 D 653.85
      E 642.71
 BCR 4 (08/198) 948.59 A 973.44
  3 (08/196) 1036.91 B 1058.25
  2 (08/194) 1004.05 C 1012.51
  1 (08/192) 1033.21 D 1079.15
      E 1017.74
 GUSB 4 (08/198) 1380.43 A 1198.94
  3 (08/196) 1454.12 B 1238.22
  2 (08/194) 1390.83 C 1261.53
  1 (08/192) 1388.23 D 1283.79
      E 1244.11

Abbreviations: CF, conversion factor; IS, International Scale; RT-ddPCR, reverse-transcription droplet digital PCR; WHO, World Health Organization.