Table 1. Assembly quality and RAST (Rapid Annotation using Subsystem Technology) annotation results for the Endozoicomonas genomes.
Genome | RAST ID | Assembly size (bp) | Contigs | Scaffolds | Scaffold N50 (bp) | Max scaffold size (bp) | CDS | RNAs | GC% |
---|---|---|---|---|---|---|---|---|---|
Endozoicomonas elysicola1 | 1121862.6 | 5,569,560 | 21 | 2 | 5,569,560 | 5,569560 | 5,021 | 104 | 46.8 |
Endozoicomonas montiporae1 | 1027273.4 | 5,602,297 | 83 | 20 | 1,015,541 | 1,412,099 | 5,350 | 114 | 48.5 |
Endozoicomonas numazuensis1 | 1137799.4 | 6,342,227 | 131 | 31 | 917,146 | 1,695,894 | 5,995 | 95 | 47.1 |
Endozoicomonas from Stylophora pistillata (Type A) | 6666666.127878 | 3,624,544 | 1,553 | 1,548 | 10,138 | 63,630 | 3,463 | 55 | 49.6 |
Endozoicomonas from Stylophora pistillata (Type B) | 6666666.127879 | 3,413,810 | 1,135 | 1,132 | 18,779 | 107,991 | 3,383 | 54 | 50.6 |
Endozoicomonas from Acropora humilis | 305899.13 | 2,304,083 | 1,698 | 1,698 | 1,686 | 8,572 | 2,142 | 19 | 49.4 |
Endozoicomonas (2 genotypes) from Pocillopora verrucosa | 305899.6 | 5,277,023 | 3,342 | 3,342 | 2,052 | 9,019 | 4,420 | 42 | 53.9 |
1E. elysicola, E. montiporae, and E. numazuensis from Neave et al.35.