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. 2017 Jan 17;17:17. doi: 10.1186/s12866-016-0919-9

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 6 — Heatmap distribution of copy numbers of mcrA, dsrA and fhs genes for all colonic samples based on qPCR data. Samples (mcrA, dsrA and fhs genes) are arranged in rows and clustered on the vertical axis (y-axis). Gene copies are arranged vertically and are on the horizontal axis (x-axis). Clustering was done for each using Phylotrac’s heatmap option with Pearson correlations and complete lineage algorithms. Different colors indicate relative abundance of the taxons. Different colors showed on the left side of the diagram indicate the four groups (Piglet-C, Piglet-P, Finisher-C and Finisher-P)