Skip to main content
. 2017 Jan 17;7:40453. doi: 10.1038/srep40453

Figure 5. Thematic representation of C. roseus transcripts related to defense, jasmonate and MIA metabolisms.

Figure 5

Transcripts with significant log2 fold changes (fed vs control) in at least one comparison were clustered according to their expression profiles. (a,b) Transcripts associated with “Plant defense” and “Oxylipin”/“Jasmonic acid” Uniprot keywords respectively. Transcripts from CDF97 assembly were annotated by searching homologies (Blastx, e-value < 1e–10) against the Uniprot database (the % of identity is indicated between brackets). Transcripts associated with the keyword “Plant defense” were further grouped according to the other keywords they were annotated with, i.e. Pathogenesis-Related proteins, Signal, Immunity and Transcription regulation. (c) Transcripts homologous to known MIA genes (blast score > 1100, %id >95%). Asterisks indicate that the expression of the corresponding transcript significantly differed between the attacked and the control samples (Linear model, p-value < 0.001).