Table 3.

Genetic variants within sub-genotypes of G. duodenalis assemblage E at the tpi, bg and gdh gene in lambs

Genetic variants	GenBank accession no	No. of isolates	Nucleotide at positions
			36	50	57	78	131	144	200	254	512
tpi gene
E (Ref.)	JF792419		G	A	C	C	C	A	A	A	G
E1	KT922261	4	*	*	*	*	*	*	*	*	*
E2	KT922262	2	A	*	T	*	*	G	*	*	*
E3	KT922260	1	*	*	T	T	*	*	*	*	*
bg gene
E (Ref.)	EU189361		G	C	G	A	G	T	A	A	G
E4	KT922250	1	*	*	*	*	*	*	*	*	*
ET-L2	KT922251	2	*	*	*	*	*	*	*	G	*
gdh gene
E (Ref.)	KR048474		G	C	G	T	G	G	G	C	T
ET-L3	KT922256	1	*	*	*	*	*	*	A	*	*
ET-L4	KU196418	1	*	T	*	*	A	*	*	*	C

Key: Asterisks (*) represent nucleotide identity