Table 2. Cleavage and religation rate constants of the 13 and 18mer Top1–DNA cleavage products trapped by CPT in Control (C) and N2-ethyl-dG adducted (−5) oligonucleotide.
13mer product | 18mer product | |||
---|---|---|---|---|
C | −5 | C | −5 | |
T1/2 (min) | 1.87 ± 0.23 | 1.88 ± 0.33 | 0.43 ± 0.1 | 1.83 ± 0.33 |
k2 (min−1) | 0.37 ± 0.05 | 0.38 ± 0.06 | 1.69 ± 0.36 | 0.38 ± 0.07 |
k1 (min−1) | 0.65 ± 0.23 | 0.39 ± 0.07 | 0.1 | 0.15 ± 0.04 |
r | 0.59 ± 0.1 | 0.5 ± 0.03 | 0.06 ± 0.01 | 0.28 ± 0.02 |
T1/2, religation rate half-life determined from the salt reversal experiments (see Figure 3D); k2, religation rate constant determined from T1/2; k1, cleavage rate constant (see Materials and Methods); r, fraction of cleavage product at the plateau (see Figure 3C).
The values are an average of three independent experiments.