Table 1.
Taxonomic distribution of organisms showing multiplicity of AHL lactonase
| Organism | Enzyme | CDa | GI No: |
|---|---|---|---|
| Gram positive bacteria | |||
| Firmicutes | |||
| Bacillus cereus | AiiA | Full (F) | gi|22095307|gb|AAM92142.1| |
| AiiA | gi|62945899|gb|AAY22194.1| | ||
| AHL-lactonase | gi|19773609|gb|AAL98724.1| | ||
| AHL-lactonase | gi|66576020|gb|AAY51613.1| | ||
| AHL-lactonase | gi|115418822|emb|CAJ84442.1| | ||
| B. cereus G9842b | Metal-dependent hydrolase (MDH) | F | gi|168144103|ref|ZP_02587332.1| |
| B. cereus H3081.97b | AHL-lactonase | Partial (P) | gi|206975410|ref|ZP_03236323.1| |
| B. cereus ATCC 14579 | AHL-hydrolase | F | gi|30021556|ref|NP_833187.1| |
| gi|30021556|ref|NP_833187.1| | |||
| MDH | gi|30022770|ref|NP_834401.1| | ||
| B. cereus B4264 | AHL-hydrolase | F | gi|168133282|ref|ZP_02576511.1| |
| MDH | P | gi|168137760|ref|ZP_02580989.1| | |
| Bacillus sp. 240B1b | MDH | F, P | gi|7416989|gb|AAF62398.1| |
| Bacillus sp. 42b | AHL-lactonase | F | gi|146743333|gb|ABQ42909.1| |
| Bacillus sp. 91b | AHL-lactonase | F | gi|146743335|gb|ABQ42910.1| |
| Bacillus sp. A24 | AiiA | F, P | gi|21541343|gb|AAM61772.1 |
| Bacillus sp. COT1b | AHL-lactonase | F | gi|19773593|gb|AAL98716.1| |
| Bacillus sp. CSX-1b | AHL-hydrolase | F | gi|109809891|gb|ABG46349.1| |
| Bacillus sp. SB4b | AHL-lactonase | F | gi|40388447|gb|AAR85482.1| |
| Bacillus sp. B14905 | HP BB14905_11105 | F | gi|126653419|ref|ZP_01725520.1| |
| YtnP | gi|126651311|ref|ZP_01723518.1| | ||
| B. subtilis | AHL-lactonase | F | gi|66576014|gb|AAY51610.1| |
| gi|66576016|gb|AAY51611.1| | |||
| gi|150256376|gb|ABR68029.1| | |||
| B. thuringiensis | AHL-lactonase | F | gi|19773603|gb|AAL98721.1 |
| gi|19773605|gb|AAL98722.1 | |||
| gi|19773595|gb|AAL98717.1| | |||
| gi|19773599|gb|AAL98719.1| | |||
| gi|19773601|gb|AAL98720.1| | |||
| B. thuringiensis | AHL-lactonase | F | gi|66576018|gb|AAY51612.1| |
| gi|34500091|gb|AAQ73629.1| | |||
| gi|34500091|gb|AAQ73629.1| | |||
| gi|90421378|gb|ABD93926.1| | |||
| gi|67107096|gb|AAY67830.1| | |||
| gi|90421372|gb|ABD93923.1| | |||
| gi|124389890|gb|ABN11118.1| | |||
| gi|90421376|gb|ABD93925.1| | |||
| gi|197253281|gb|ACH54082.1| | |||
| gi|38564660|gb|AAR23790.1| | |||
| F, P | gi|90421370|gb|ABD93922.1| | ||
| gi|90421374|gb|ABD93924.1| | |||
| P(2) | gi|146743337|gb|ABQ42911.1| | ||
| B. thuringiensis | AiiA | F | gi|209944153|gb|ACI96332.1| |
| gi|209944159|gb|ACI96335.1| | |||
| gi|209944167|gb|ACI96339.1| | |||
| gi|209944163|gb|ACI96337.1| | |||
| gi|209944151|gb|ACI96331.1| | |||
| gi|209944161|gb|ACI96336.1| | |||
| gi|209944165|gb|ACI96338.1| | |||
| gi|209944169|gb|ACI96340.1| | |||
| gi|209944155|gb|ACI96333.1| | |||
| gi|209944157|gb|ACI96334.1| | |||
| gi|209944171|gb|ACI96341.1| | |||
| gi|209944173|gb|ACI96342.1| | |||
| B. thuringiensis | AHL-lactonase | F | gi|194709246|pdb|3DHA| |
| gi|85544298|pdb|2BR6| | |||
| gi|125711135|gb|ABN51242.1| | |||
| B. thuringiensis serovar canadensis | AiiA-like protein | F | gi|22095279|gb|AAM92128.1| |
| B. thuringiensis serovar galleriae | AiiA-like protein | gi|22095283|gb|AAM92130.1| | |
| B. thuringiensis serovar kyushuensis | AiiA-like protein | gi|22095289|gb|AAM92133.1| | |
| B. thuringiensis serovar ostriniae | AiiA-like protein | gi|22095293|gb|AAM92135.1| | |
| B. thuringiensis serovar pakistani | AiiA-like protein | gi|22095295|gb|AAM92136.1| | |
| B. thuringiensis serovar toumanoffi | AiiA-like protein | gi|22095301|gb|AAM92139.1| | |
| B. thuringiensis serovar japonensis | AHL-lactonase | gi|33187780|gb|AAP97743.1| | |
| B. thuringiensis serovar kim | AHL-lactonase | gi|33187778|gb|AAP97742.1| | |
| B. thuringiensis serovar jinhongiensis | AiiA-like enzyme | gi|28413984|gb|AAO40748.1| | |
| B. thuringiensis serovar oswaldocruzi | AiiA-like enzyme | gi|28413776|gb|AAO40747.1| | |
| B. thuringiensis serovar kurstaki | AHL-hydrolase | gi|75766091|pdb|2A7 M| | |
| B. thuringiensis serovar alesti | AHL-hydrolase | gi|124014030|gb|ABM88266.1| | |
| B. thuringiensis str. Al Hakam | MDH | gi|118479835|ref|YP_896986.1| | |
| B. thuringiensis serovar israelensis ATCC 35646 | AHL-hydrolase | F | gi|75761848|ref|ZP_00741777.1| |
| MDH | gi|75761592|ref|ZP_00741546.1| | ||
| Lysinibacillus sphaericus C3-41 | HP Bsph_3377 | F | gi|169828841|ref|YP_001698999.1| |
| YtnP | gi|169829648|ref|YP_001699806.1| | ||
| Deinococcus-Thermus | |||
| Deinococcus radiodurans R1 | Hypothetical protein (HP) DR_0172 | F | gi|15805209|ref|NP_293896.1| |
| HP DR_1823 | gi|15806823|ref|NP_295546.1| | ||
| Gram negative bacteria | |||
| Alphaproteobacteria | |||
| Agrobacterium tumefaciens str. C58 | MDH | F | gi|16119885|ref|NP_396590.1| |
| MDH | P | gi|159186505|ref|NP_396071.2| | |
| A. tumefaciens b | AttM/AiiB | P | gi|17223785|gb|AAL13075.1| |
| BradyRhizobium sp. ORS278 | putative metallo-beta-lactamase family protein | F | gi|146341021|ref|YP_001206069.1| |
| putative MDH | gi|146343732|ref|YP_001208780.1| | ||
| putative signal peptide | gi|146339571|ref|YP_001204619.1| | ||
| BradyRhizobium japonicum b | AttM-like protein | F | gi|6655034|gb|AAF22881.1| |
| B. japonicum USDA 110b | AttM/AiiB family protein | F | gi|27380160|ref|NP_771689.1| |
| Euryarchaeota | |||
| Thermoplasma volcanium GSS1 | MDH (AttM-related) | F | gi|13542116|ref|NP_111804.1| |
| MDH | gi|13541013|ref|NP_110701.1| | ||
| HP | gi|14324397|dbj|BAB59325.1| | ||
aReference organism used was Bacillus sp. SB4 (Accession No. AAR854821) for searching Conserved Domains (CDs) of Lactamase_B, superfamily
bThis information has been retained in the Table to show variability in copy number in different species of a given Genus