Table 6.
3′-consensus sequence for RRV gene 5 | UGN0–5CC |
3′-ends of other group A viruses: | |
SA11 gene 2 (VP2) | UaUGACC |
K9 gene 5 (NSP1) | UGUGAaCC |
KU gene 5 (NSP1) | UGUGAaCC |
SA11 gene 5 (NSP1) | UGUGAaCC |
SA11 gene 7 (NSP3) | UGUGgCC |
Common 3′-motif | URN0–5CC |
Common 3′-motif excluding gene 5 | URUGRCC |
R=ATP, GTP; N=ATP, CTP, GTP, UTP.