Table 1.
Summary of the transcriptome assembly.
| Samples | Control_rep1 | Control _rep2 | GA 6 h_rep1 | GA 6 h_rep2 | GA 12 h_rep1 | GA 12 h_rep2 |
|---|---|---|---|---|---|---|
| Raw reads | 50,991,998 | 56,788,784 | 60,288,014 | 58,393,488 | 44,280,996 | 52,072,848 |
| Clean reads (%) | 48,705,848 (95.52) | 54,275,188 (95.57) | 57,631,340 (95.59) | 55,720,738 (95.42) | 42,311,862 (95.55) | 49,993,570 (96.01) |
| Clean bases | 7.31G | 8.14G | 8.64G | 8.36G | 6.35G | 7.50G |
| Q20 (%) | 97.52 | 97.42 | 97.38 | 97.43 | 97.28 | 97.36 |
| GC (%) | 43.63 | 43.60 | 43.51 | 43.53 | 43.46 | 43.54 |
| Mapped clean reads (%) | 42,119,358 (86.48) | 46,783,558 (86.20) | 49,881,555 (86.55) | 48,281,412 (86.65) | 36,728,637 (86.80) | 43,283,227 (86.58) |
| Unique mapped clean reads (%) | 41,622,535 (85.46) | 46,245,871 (85.21) | 49,302,733 (85.55) | 47,674,994 (85.56) | 36,276,717 (85.74) | 42,766,514 (85.54) |