Table 7.
No. | Region amplified | Forward primer (5′ → 3′) | Reverse primer (5′ → 3′) | Size (bp) | Annealing temperature (°C) |
---|---|---|---|---|---|
1 | trnK-rps16 | TGGGTTCATAGGACTCTATCCA | TTGCAATTGATGTGCGATCTCGA | 1202 | 56 |
2 | trnS-trnG | ACCGAGTTATCAACGGAAACGGA | TAAAGTTTCTGCTCGGAATAAGA | 882 | 53 |
3 | trnG-trnR-atpA | TCTAGAGGGATTATCTAGAAAGCA | AAGAGGTCAACGATTACGTGAGT | 975 | 55 |
4 | trnE-trnT | AGAGGAATGTCCGTTGGG | CGATGACTTACGCCTTACC | 1471 | 53 |
5 | rbcL-accD | TCTCTTAATTGAATTGCAATTCA | AATAGATGAATAGTCATTCGATGA | 703 | 49.5 |
6 | psbL-psbF-psbE | GTGATCCTTCCGAATGGGATAAG | CAGTGAATTTCCATTTACTGATAT | 672 | 51.8 |
7 | trnP-psaJ-rpl33 | AGTAGAAGGTTTATATATCTAATA | GATTATTTCGTTGCAATCACAAC | 905 | 48.5 |
8 | rrn16-trnI | TTAGTTGCCACCGGTATGAGAGT | GGTCCTCTTCCCCATTACTTAGA | 1845 | 58 |
9 | ccsA | AGGTATAATCCATGAATATTGAT | TGAATTCATTATAGGACTTATTA | 1755 | 48 |
10 | ndhG-ndhI | ATCGGTTGATAAATGAATTCCAA | CAAGGTTCAATTTGATCTAATCT | 790 | 51 |
11 | rps15-ycf1 | TAAGTCTTCGTATCTTATTGGTG | GAGTTTGGATATTCTGATGATTCA | 1122 | 53 |
12 | ycf1 | TAACCTCAGCCTTAGCATT | GGACAGAATAGACAAACCCT | 2191 | 50 |