TABLE 1.
Virus name | Subtype | Mortality (%) | Survival scorea | Weight loss scoreb | Total pathogenicity scorec | PId |
---|---|---|---|---|---|---|
A/blue-winged teal/TX/578588/2002 | H7N1 | 100 | 0.240 | 0.060 | 0.300 | 4 |
A/ruddy turnstone/NJ/65/1985 | H7N3 | 100 | 0.251 | 0.049 | 0.301 | 4 |
A/pintail/Alberta/25/2001 | H7N3 | 100 | 0.257 | 0.06 | 0.318 | 4 |
A/mallard/Alberta/195/1989 | H7N3 | 100 | 0.274 | 0.072 | 0.347 | 4 |
A/blue-winged teal/TX/AI12-909/2012 | H7N1 | 100 | 0.286 | 0.072 | 0.358 | 4 |
A/laughing gull/Delaware Bay/42/2006 | H7N3 | 100 | 0.309 | 0.072 | 0.380 | 4 |
A/shorebird/DE/22/2006 | H7N3 | 100 | 0.297 | 0.084 | 0.381 | 4 |
A/mallard/Alberta/699/1981 | H7N3 | 100 | 0.300 | 0.082 | 0.382 | 4 |
A/mallard/Alberta/93/1996 | H7N3 | 100 | 0.229 | 0.071 | 0.399 | 4 |
A/mallard/Alberta/590/2010 | H7N8 | 100 | 0.331 | 0.075 | 0.406 | 4 |
A/ruddy turnstone/Delaware Bay/262/2006 | H7N3 | 100 | 0.331 | 0.075 | 0.407 | 4 |
A/blue-winged teal/MN/AI09-3760/2009 | H7N3 | 100 | 0.377 | 0.087 | 0.464 | 4 |
A/mallard/Alberta/243/2006 | H7N3 | 100 | 0.389 | 0.096 | 0.485 | 4 |
A/mallard/Alberta/49/1976 | H7N3 | 100 | 0.400 | 0.108 | 0.508 | 3 |
A/green-winged teal/Alberta/228/1985 | H7N3 | 100 | 0.446 | 0.092 | 0.538 | 3 |
A/mallard/MN/AI08-5469/2008 | H7N3 | 100 | 0.457 | 0.103 | 0.561 | 3 |
A/mallard/MN/AI07-3433/2007 | H7N3 | 100 | 0.469 | 0.116 | 0.584 | 3 |
A/shorebird/Delaware Bay/2696/1988 | H7N3 | 80 | 0.457 | 0.180 | 0.637 | 2 |
A/ruddy turnstone/NJ/AI11-2098/2011 | H7N3 | 60 | 0.457 | 0.184 | 0.641 | 2 |
A/blue-winged teal/LA/AI11-2911/2011 | H7N3 | 80 | 0.491 | 0.174 | 0.665 | 2 |
A/mallard/Alberta/167/2010 | H7N3 | 80 | 0.503 | 0.191 | 0.694 | 2 |
A/mallard/Alberta/192/2010 | H7N3 | 80 | 0.549 | 0.180 | 0.728 | 2 |
A/ruddy turnstone/NJ/AI11-1678/2011 | H7N7 | 80 | 0.557 | 0.192 | 0.749 | 2 |
A/ruddy turnstone/Delaware Bay/126/1996 | H7N3 | 60 | 0.583 | 0.180 | 0.763 | 2 |
A/mallard/MN/AI09-3770/2009 | H7N9 | 80 | 0.594 | 0.183 | 0.778 | 2 |
A/laughing gull/DE/AI00-2455/2000 | H7N3 | 40 | 0.617 | 0.192 | 0.809 | 2 |
A/mallard/MN/19033/1999 | H7N7 | 20 | 0.731 | 0.184 | 0.915 | 1 |
A/red knot/Delaware Bay/242/1994 | H7N7 | 0 | 0.800 | 0.190 | 0.990 | 1 |
A/ruddy turnstone/DE/AI00-1538/2000 | H7N9 | 0 | 0.800 | 0.194 | 0.994 | 1 |
A/shorebird/Delaware Bay/285/1994 | H7N7 | 0 | 0.800 | 0.196 | 0.996 | 1 |
The survival score was calculated as follows: 0.8 × (survival AUC/maximum AUC).
The weight loss score was calculated as follows: 0.2 × (weight loss AUC/maximum AUC).
The total pathogenicity score was the sum of the survival and weight loss scores.
Pathogenicity indices classify viruses as follows: most pathogenic (4) to least pathogenic (1).