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. 2016 Aug 22;2(6):767–782.e6. doi: 10.1016/j.jcmgh.2016.08.001

Supplementary Table 1.

The Primers Used in the Present study

Gene name Accession no Primer sequence Size Annealing temperature
Genotyping
 Gna11+ F GCCCCTTGTACAGATGGCAG 820 bp 60°C
  R AGCATGCTGTAAGACCGTAG
 Gna11- F CAGGGGTAGGTGATGATTGTGC 450 bp 60°C
  R GACTAGTGAGACGTGCTACTTCC
 Gnaq+ F AGCTTAGTCTGGTGACAGAAGC 600 bp 60°C
 Gnaqflox R GCATGCGTGTCCTTTATGTGAG 700 bp
 Cre recombinase F CAATTTACTGACCGTACAC 1026 bp 60°C
  R TAATGCCATCTTCCAGCAG
Reverse-transcription PCR
 Gnaq NM_008139 F TGGACCGTGTAGCCGACCCT 270 bp 60°C
  R GTGCTTTGCTCTCCTCCATGCGG
 Gna11 NM_010301 F ACGAGGTGAAGGAGTCGAAGC 573 bp 60°C
  R CCATCCTGAAGATGATGTTCTCC
 Actb NM_007393 F TGAGAGGGAAATCGTGCGTG 460 bp 60°C
  R GATCCACATCTGCTGGAAGGTG
Real-time PCR
 1 PKCα NM_011101 F GCTTCCAGTGCCAAGTTTGC 76 bp 60°C
  R GCACCCGGACAAGAGAACGTAA
 2 PKCδ NM_011103 F TATCAACTGGTCCCTCCTGG 105 bp 60°C
  R CATTCAGGAACTCTGGGTCA
 3 Lyz NM_013590 F GGTCTACAATCGTTGTGAGTTGG 387 bp 65°C
  R CTCCGCAGTTCCGAATATACT
 4 Defa1 NM_010031 F TCAAGAGGCTGCAAAGGAAGAGAAC 94 bp 60°C
  R TGGTCTCCATGTTCAGCGACAGC
 5 EphB3 NM_010143 F CCATAGCCTATCGGAAGTTTACGT 87 bp 60°C
  R TCGCTCTCCGTAGCTCATGAC
 6 EphB2 NM_001290753 F CTCTACTGTAACGGGGACGG 119 bp 60°C
  R TTGAAGGTTCCTGATGGACA
 7 Fzd5 NM_001042659 F GTGCTTCATCTCCACGTCCA 103 bp 60°C
  R CAGGTAGCACGCAGACAAGA
 8 Fzd7 NM_008057 F ACCCTACTGCTCCCTACCTG 84 bp 60°C
  R AGAAGGGGAAAGACAAGCGG
 9 Wnt5a NM_009524 F ACAGGCATCAAGGAATGCCA 104 bp 60°C +DMSO
  R CGGCTGCCTATTTGCATCAC
 10 Tcf4 NM_013685 F AGCCCGTCCAGGAACTATG 101 bp 60°C
  R TGGAATTGACAAAAGGTGGA
 11 Ascl2 NM_008554 F TCCAGTTGGTTAGGGGGCTA 107 bp 60°C
  R GCATAGGCCCAGGTTTCTTG
 12 Axin2 NM_015732 F TGAGATCCACGGAAACAGC 104 bp 60°C
  R GTGGCTGGTGCAAAGACAT
 13 Dll1 NM_007865 F GGAGAAGATGTGCGACCCT 103 bp 60°C
  R CTCCCCTGGTTTGTCACAGT
 14 Dll4 NM_019454 F ATGGGGAGGTCTGTTTTGTG 101 bp 60°C
  R TATAACCCTTTGGCCCACTG
 15 Notch1 NM_008714 F CAAGAGGCTTGAGATGCTCC 132 bp 65°C
  R AAGGATTGGAGTCCTGGCAT
 16 Hes1 NM_008235 F CTGGTGCTGATAACAGCGGA 80 bp 60°C
  R AGGGCTACTTAGTGATCGGT
 17 Hes5 NM_010419 F CAAGGAGAAAAACCGACTGCG 188 bp 60°C +DMSO
  R CGAAGGCTTTGCTGTGTTTCA
 18 Atoh1 NM_007500 F GTGCGATCTCCGAGTGAGAG 108 bp 60°C
  R GGGATAAGCCCCGAACAACA
 19 Lgr5 NM_010195 F CAACCTCAGCGTCTTCACCT 96 bp 60°C +DMSO
  R TCTTCTAGGAAGCAGAGGCG
 20 Bmi1 NM_007552 F CTTTCATTGTCTTTTCCGCC 90 bp 60°C
  R TGGTTGTTCGATGCATTTCT
 21 Spdef NM_013891 F CACGTTGGATGAGCACTCGCTA 142 bp 60°C
  R AGCCACTTCTGCACGTTACCAG
 22 Gfi1 NM_010278 F GGCAAAAGATTCCACCAGAA 110 bp 60°C
  R TTGGAGCTCTGACTGAAGGC
 23 Cdx1 NM_009880 F GACGCCCTACGAATGGATGC 80 bp 60°C
  R ACTTGTCCTTGGTTCGGGTC
 24 Cdx2 NM_007673 F CCTACCCACGAACAGCATCTACT 69 bp 60°C
  R CCTGAGGTCCATAATTCCACTCA
 25 Stk11 (Lkb1) NM_001301853 F CTACTCCGAGGGATGTTGGA 115 bp 60°C
  R GATAGGTACGAGCGCCTCAG
 26 Ihh NM_010544 F GACTCATTGCCTCCCAGAACTG 150 bp 60°C
  R CCAGGTAGTAGGGTCACATTGC
 27 Fgfr3 NM_001163215 F TCGTGGCTGGAGCTACTTC 95 bp 60°C
  R CTCCTGCTGGCTAGGTTCAG
 28 Actb NM_007393 F CTTCCTCCCTGGAGAAGAGC 101 bp 60°C
  R AAGGAAGGCTGGAAAAGAGC

DMSO, dimethyl sulfoxide; F, forward; Lgr5, leucine-rich repeat-containing G-protein-coupled receptor 5; R, reverse; Spdef, SAM pointed domain-containing Ets transcription factor.