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. 2017 Jan 20;7:41040. doi: 10.1038/srep41040

Table 3. Transporters regulated on transcriptional level during citrate fermentation.

Gene ID Gene function FPKM-6h FPKM-12h FPKM-24h FPKM-36h FPKM-48h
evm.model.unitig_3.636 ABC transporter C family member 13.1977 35.3317 58.9041 46.401 37.9172
evm.model.unitig_3.637 Canalicular multispecific organic anion transporter 1 28.5373 87.9929 149.208 97.0309 73.4379
evm.model.unitig_3.640 Canalicular multispecific organic anion transporter 1 20.4793 107.35 223.035 296.068 305.751
evm.model.unitig_0.1084 Canalicular multispecific organic anion transporter 2 8.0014 40.5062 79.4721 84.8434 60.4354
evm.model.unitig_5.1021 Sodium/potassium-transporting ATPase subunit alpha-1 63.2289 130.481 286.188 272.621 353.328
evm.model.1.100 succinate/fumarate transporter 60.1747 7.32488 4.93716 3.10826 7.87887
evm.model.1.1208 Uncharacterized transporter 20.1262 657.514 638.877 605.893 604.348
evm.model.1.31 Probable metabolite transport protein 19.7919 47.7725 103.538 138.268 150.005
evm.model.1.352 plasma membrane fusion protein prm1 4.66831 21.8264 107.014 162.537 109.181
evm.model.1.69 amino acid transporter 26.4711 6.00714 4.01169 3.26287 4.30079
evm.model.1.857 Uncharacterized MFS-type transporter 262.407 35.7379 29.1139 28.839 18.9121
evm.model.unitig_0.1595 Uncharacterized transporter 7.69787 24.2853 42.5223 80.5382 81.6519
evm.model.unitig_0.437 quinate permease 2.52556 23.0903 55.1789 28.4854 22.4314
evm.model.unitig_1.1394 MFS multidrug transporter 1144.22 178.003 114.492 36.4788 28.1839
evm.model.unitig_1.578 Mitochondrial 2-oxodicarboxylate carrier 2 826.306 390.695 405.997 283.533 284.765
evm.model.unitig_2.1188 amino-acid permease inda1 157.845 440.541 549.456 578.762 548.658
evm.model.unitig_2.1237 MFS transporter 16.3143 61.9491 77.3993 77.3265 65.6228
evm.model.unitig_2.1258 Glutathione transporter 1 53.949 4.04985 2.2213 1.01079 0.489433
evm.model.unitig_2.1390 vacuolar calcium ion transporter 252.61 622.261 657.009 600.778 603.315
evm.model.unitig_2.1392 vacuolar calcium ion transporter 32.1809 68.8772 91.3865 94.9701 77.2152
evm.model.unitig_2.45 MFS transporter 38.4455 12.7329 3.27757 1.25471 0.357967
evm.model.unitig_2.532 calcium transporter 53.9308 119.391 153.595 189.557 130.659
evm.model.unitig_2.827 urea active transporter 1 15.9503 43.262 77.2426 53.5096 52.18
evm.model.unitig_2.971 corA family metal ion transporter 7.22867 189.826 347.136 300.912 301.19
evm.model.unitig_3.1075 galactose-proton symport 687.339 254.727 116.009 82.0497 93.8167
evm.model.unitig_3.1191 quinate permease 0 25.5055 36.3913 25.114 34.4627
evm.model.unitig_3.62 ABC transporter 39.1748 78.3932 116.238 125.325 118.615
evm.model.unitig_3.635 Oligopeptide transporter 14.6011 104.855 128.548 199.55 116.732
evm.model.unitig_4.1038 Uncharacterized permease 63.5294 161.174 243.495 213.192 141.02
evm.model.unitig_4.1122 Zinc-regulated transporter 1 26.221 868.686 1163.35 831.676 662.476
evm.model.unitig_4.29 MFS multidrug transporter 28.1368 65.3458 79.5197 108.998 84.1431
evm.model.unitig_4.558 sugar transporter 60.7082 28.922 24.2149 12.3733 23.8319
evm.model.unitig_4.58 zinc-regulated transporter 1 27.4409 86.7798 89.9594 104.495 106.612
evm.model.unitig_4.660 MFS allantoate transporter 9.26185 27.5775 126.026 91.9883 92.9983
evm.model.unitig_4.694 Transport protein particle 20 kDa subunit 71.691 35.4592 31.7326 35.1786 31.681
evm.model.unitig_4.966 copper transporter family protein 89.4315 386.8 247.155 674.724 409.464
evm.model.unitig_5.1028 Oligopeptide transporter 427.735 1076.43 1775.18 1632.03 1598.71
evm.model.unitig_6.240 corA family metal ion transporter 89.6403 201.674 232.638 230.226 243.676
evm.model.unitig_6.447 monocarboxylate transporter 50.1323 135.575 189.269 239.416 254.186
evm.model.unitig_6.486 low affinity iron transporter 3.69287 73.9308 190.217 325.134 557.337
evm.model.unitig_6.549 Purine-cytosine permease fcyB 59.0138 194.498 328.304 284.184 176.873
evm.model.unitig_6.821 MFS toxin efflux pump 49.4076 103.654 164.539 173.255 159.919
evm.model.unitig_6.853 Choline transport protein 3.65766 51.889 48.6358 93.561 47.9792
evm.model.unitig_6.875 MFS transporter 2.1797 23.2597 24.884 45.0643 33.2642
evm.model.unitig_3.110 Hexose transporter 5.8594 29.5108 54.735 74.547 275.829
evm.model.unitig_3.919 OPT oligopeptide transporter family 3.40145 42.7754 192.636 367.982 323.622