Table 2.

Trimers and long OGs induce gene sets associated with phytohormones, stress and defense signaling

Gene set	ID	Size	NES	P-value
RESPONSE_TO_ORGANIC_SUBSTANCE	GO:0010033	59	2.11	0.00
OXYLIPIN_METABOLIC_PROCESS	GO:0031407	9	2.10	0.00
OXYLIPIN_BIOSYNTHETIC_PROCESS	GO:0031408	9	2.05	0.00
JASMONIC_ACID_METABOLIC_PROCESS	GO:0009694	8	1.92	0.00
JASMONIC_ACID_BIOSYNTHETIC_PROCESS	GO:0009695	8	1.90	0.00
RESPONSE_TO_CARBOHYDRATE_STIMULUS	GO:0009743	27	1.84	0.00
CELLULAR_RESPONSE_TO_CHEMICAL_STIMULUS	GO:0070887	33	1.78	0.02
RESPONSE_TO_CHITIN	GO:0010200	26	1.78	0.02
FATTY_ACID_BIOSYNTHETIC_PROCESS	GO:0006633	12	1.75	0.02
CELLULAR_RESPONSE_TO_STIMULUS	GO:0051716	49	1.74	0.02
IMMUNE_SYSTEM_PROCESS	GO:0002376	49	1.70	0.03
CELLULAR_RESPONSE_TO_STRESS	GO:0033554	45	1.67	0.03
RESPONSE_TO_ETHYLENE_STIMULUS	GO:0009723	14	1.66	0.03
IMMUNE_RESPONSE	GO:0006955	49	1.64	0.03
RESPONSE_TO_FUNGUS	GO:0009620	32	1.64	0.03
INNATE_IMMUNE_RESPONSE	GO:0045087	49	1.63	0.02
RESPONSE_TO_CYCLOPENTENONE	GO:0010583	11	1.61	0.04
PROGRAMMED_CELL_DEATH	GO:0012501	26	1.61	0.04
PLANT-TYPE_HYPERSENSITIVE_RESPONSE	GO:0009626	26	1.61	0.03
HOST_PROGRAMMED_CELL_DEATH_INDUCED_BY_SYMBIONT	GO:0034050	26	1.60	0.04

The 20 most significantly up-regulated gene sets based on the GO database are presented, as determined by a GSEA on the GenePattern platform using the combined trimer and long OG gene expression data