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. 2016 Dec 22;17(Suppl 3):158. doi: 10.1186/s12863-016-0466-2

Table 2.

Overrepresented (BH adjusted p-value < 0.05) GO terms (biological processes, molecular functions, cellular compartments) that characterize functional groups of genes presented in Fig. 2b.

Functional group GO category GO class Number of genes from the compendium annotated by the category Fold Enrichment BH adjusted p-value
Transmembrane receptors GO:0004888 ~transmembrane receptor activity Molecular function 89 2.09 1.6E-09
Transcription factors GO:0003700 ~ transcription factor activity Molecular function 52 1.63 1.1E-02
Signaling molecules (hormones, neuropeptides, cytokines, etc.) GO:0005179 ~ hormone activity Molecular function 37 10.48 1.5E-24
GO:0005184 ~ neuropeptide hormone activity Molecular function 15 19.95 7.6E-14
GO:0005125 ~ cytokine activity Molecular function 16 2.51 3.2E-02
Signal transduction GO:0004871 ~ signal transducer activity Molecular function 139 1.87 3.2E-12
Cilium or BBSome GO:0060271 ~ cilium morphogenesis Biological process 10 8.77 1.5E-05
GO:0034464 ~ BBSome Cellular component 7 31.56 1.8E-07
Lipid localization GO:0008289 ~ lipid binding Molecular function 34 2.31 3.9E-04
Transcriptional coregulators Nonea
Enzymes (regulatory) None
Enzymes (metabolic) None

The list of 578 genes from the compendium was analyzed with the DAVID-tool. The significance level for the BH adjusted p-value was 0.05

aNone – No overrepresented GO terms were found