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Gene conversion analysis of Bo/CV521-OH/02/US compared with Bo/Jena/80/DE (black) and Bo/Newbury-2/76/UK (gray), using RIP (http://hivweb.lanl.gov/RIP/RIPsubmit.html). Program options were a window size of 100 and a threshold for statistical significance of 90%. The RdRp and capsid regions are indicated.
