Table 1. Location of putative HP1043 binding sites.
| Peak_name | start:end | Score | Class | Nearest genes |
|---|---|---|---|---|
| HsrA_Peak_1 | 342452:342626 | 33634,2 | bidirectional promoter | nadE < tRNA-Arg > ilvC |
| HsrA_Peak_2 | 1570125:1570299 | 29290,7 | promoter | > tRNA-Phe |
| HsrA_Peak_3 | 1476498:1476672 | 27064 | promoter | 16SrRNA< |
| HsrA_Peak_4$ | 1:126 | 26419 | promoter | > HPG27_RS07980 |
| HsrA_Peak_5 | 448262:448436 | 24526,6 | promoter | tRNA-Pro < |
| HsrA_Peak_6 | 1212453:1212627 | 22077 | promoter | fldA < |
| HsrA_Peak_7 | 1276504:1276678 | 21217,1 | promoter | atpE< |
| HsrA_Peak_8 | 1194610:1194784 | 20592,6 | promoter | 16SrRNA< |
| HsrA_Peak_9 | 1140440:1140614 | 20533 | bidirectional promoter | galE<tRNA-Ile |
| HsrA_Peak_10 | 1234366:1234540 | 20239,5 | bidirectional promoter | nupC<tRNA-Met > HPG27_RS05875 |
| HsrA_Peak_11 | 1648608:1648782 | 17967,3 | promoter | > flgG2,flgG |
| HsrA_Peak_12 | 1198357:1198531 | 17780,6 | promoter | rpS16,rpsP < |
| HsrA_Peak_13 | 1411804:1411978 | 17187,4 | bidirectional promoter | asRNA_HPG27_RS06840< > HPG27_RS06835 (pseudogene) |
| HsrA_Peak_14 | 1268342:1268516 | 16391,8 | promoter | secE < |
| HsrA_Peak_15 | 96262:96436 | 16366,7 | bidirectional promoter | fabD < tRNA-Ser |
| HsrA_Peak_16 | 1275920:1276094 | 15715,5 | intergenic | tRNA-Leu«tRNA-Leu |
| HsrA_Peak_17 | 1135651:1135825 | 15701,4 | bidirectional promoter | nrdB,nrdF< > tRNA-Leu |
| HsrA_Peak_18 | 395023:395197 | 15492,7 | promoter | tRNA-Ser < |
| HsrA_Peak_19 | 829599:829773 | 14406,8 | promoter | as_HPG27_RS03935< |
| HsrA_Peak_20 | 1290665:1290839 | 14058,4 | bidirectional promoter | hemN2,hemN< > cytc553 |
| HsrA_Peak_21 | 1576835:1577009 | 13402,5 | promoter | isoA< |
| HsrA_Peak_22 | 536813:536987 | 13358,6 | promoter | cncR1_Hpnc2630< |
| HsrA_Peak_23 | 1573020:1573194 | 13228,3 | internal | dnaA< |
| HsrA_Peak_24 | 1362385:1362559 | 12858 | promoter | rpl36,rpmJ< |
| HsrA_Peak_25 | 94349:94523 | 11431,6 | promoter | rpoD< |
| HsrA_Peak_26 | 1163325:1163499 | 11422,2 | promoter | > asRNA_HPG27_RS05530 (Hpnc3560) |
| HsrA_Peak_27 | 79140:79314 | 11103,6 | promoter | tRNA-Val< |
| HsrA_Peak_28 | 1099169:1099343 | 10857,3 | promoter | > rps1,rpsA |
| HsrA_Peak_29 | 16420:16594 | 10304,9 | bidirectional promoter | putative_SRP_RNA < > HPG27_RS00110 |
| HsrA_Peak_30 | 1270429:1270603 | 10176,2 | promoter | > hetA |
| HsrA_Peak_31 | 1318842:1319016 | 9864 | bidirectional promoter | bioC < > secG |
| HsrA_Peak_32 | 1196544:1196718 | 9212,8 | promoter | rpl19,rplS< |
| HsrA_Peak_33 | 722928:723102 | 8986,8 | internal | > flgR |
| HsrA_Peak_34 | 478010:478184 | 8089,2 | promoter | > hofC |
| HsrA_Peak_35 | 4434:4608 | 7929,2 | internal | tRNA-Lys < |
| HsrA_Peak_36 | 31591:31765 | 7905,6 | bidirectional promoter | HPG27_RS00165< > uspA |
| HsrA_Peak_37 | 1480392:1480566 | 7634,1 | promoter | > rpl34,rpmH |
$Located on G27 plasmid; Bold, feature included in the peak; >/<, target gene strand.