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. 2004 Nov;48(11):4377–4386. doi: 10.1128/AAC.48.11.4377-4386.2004

TABLE 1.

Pyrimidine salvage pathway genes analyzed and primers used in this studya

Gene Gene product Primers for PCR Amplicon size (bp) Primers for sequencing Size of ORF (bp) Introns Intron size (bp) No. of amino acid residues
FCY21 Cytosine permease For 5′-TATAATTCTCCCATCACCATC-3′ 1,847 For 5′-GGTGCCACTTTAGCCATTTG-3′ 1,545 0 514
Rev 5′-ACCGCTGCTTCTCTCTCCAC-3′ Rev 5′-GTCTTAATCCTAAAGCTGATCC-3′ For 5′-CTAGTAAATCATTTGAAGGTGGTG-3′
Rev 5′-CAAGCAGCACCCAATATTAAAG-3′
FCY22 Cytosine permease For 5′-CCCTTCACTCCAACTCTTTCC-3′ 1,686 For 5′-CCCTTCACTCCAACTCTTTCC-3′ 1,581 0 526
Rev 3′-CAACATTTAAATAACACGGCAGAATG-3′ Rev 3′-CAACATTTAAATAACACGGCAGAATG-3′
For 5′-TCTGGTCCAACTGAAGCTGG-3′
Rev 5′-GGTAATGATAACCCGGTGGTC-3′
FCA1 Cytosine deaminase For 5′-GTCACTTCAAAGTACCAATCTTTA-3′ 633 For 5′-GTCACTTCAAAGTACCAATCTTTA-3′ 523 1 70 150
Rev 3′-GTTTAAGTTTTATATTACACTAATCTG-3′ Rev 3′-GTTTAAGTTTTATATTACACTAATCTG-3′
FUR1 UPRT For 5′-GTCCCAATTTCTTCATCATG-3′ 911 For 5′-GTCCCAATTTCTTCATCATG-3′ 657 0 218
Rev 3′-TCCAGATATAGTACATGTAAAGTG-3′ Rev 3′-TCCAGATATAGTACATGTAAAGTG-3′
a

ORF, open reading frame.