TABLE 1.
Pyrimidine salvage pathway genes analyzed and primers used in this studya
Gene | Gene product | Primers for PCR | Amplicon size (bp) | Primers for sequencing | Size of ORF (bp) | Introns | Intron size (bp) | No. of amino acid residues |
---|---|---|---|---|---|---|---|---|
FCY21 | Cytosine permease | For 5′-TATAATTCTCCCATCACCATC-3′ | 1,847 | For 5′-GGTGCCACTTTAGCCATTTG-3′ | 1,545 | 0 | 514 | |
Rev 5′-ACCGCTGCTTCTCTCTCCAC-3′ | Rev 5′-GTCTTAATCCTAAAGCTGATCC-3′ For 5′-CTAGTAAATCATTTGAAGGTGGTG-3′ | |||||||
Rev 5′-CAAGCAGCACCCAATATTAAAG-3′ | ||||||||
FCY22 | Cytosine permease | For 5′-CCCTTCACTCCAACTCTTTCC-3′ | 1,686 | For 5′-CCCTTCACTCCAACTCTTTCC-3′ | 1,581 | 0 | 526 | |
Rev 3′-CAACATTTAAATAACACGGCAGAATG-3′ | Rev 3′-CAACATTTAAATAACACGGCAGAATG-3′ | |||||||
For 5′-TCTGGTCCAACTGAAGCTGG-3′ | ||||||||
Rev 5′-GGTAATGATAACCCGGTGGTC-3′ | ||||||||
FCA1 | Cytosine deaminase | For 5′-GTCACTTCAAAGTACCAATCTTTA-3′ | 633 | For 5′-GTCACTTCAAAGTACCAATCTTTA-3′ | 523 | 1 | 70 | 150 |
Rev 3′-GTTTAAGTTTTATATTACACTAATCTG-3′ | Rev 3′-GTTTAAGTTTTATATTACACTAATCTG-3′ | |||||||
FUR1 | UPRT | For 5′-GTCCCAATTTCTTCATCATG-3′ | 911 | For 5′-GTCCCAATTTCTTCATCATG-3′ | 657 | 0 | 218 | |
Rev 3′-TCCAGATATAGTACATGTAAAGTG-3′ | Rev 3′-TCCAGATATAGTACATGTAAAGTG-3′ |
ORF, open reading frame.