Table 1.
The species analyzed within this study.
| Species | Order | Family | Total | Clade counts | |||
|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | ||||
| EUDICOTS | |||||||
| Amaranthus hypochondriacus | Caryophyllales | Amaranthaceae | 12 | 2 | 4 | 4 | 2 |
| Aquilegia coerulea | Ranunculales | Ranunculaceae | 12 | 1 | 3 | 3 | 5 |
| Arabidopsis halleri | Brassicales | Brassicaceae | 25 | 3 | 1 | 5 | 16 |
| Arabidopsis lyrata | Brassicales | Brassicaceae | 33 | 4 | 2 | 7 | 20 |
| Arabidopsis thaliana | Brassicales | Brassicaceae | 37 | 3 | 3 | 8 | 23 |
| Brassica rapa | Brassicales | Brassicaceae | 32 | 6 | 5 | 12 | 9 |
| Capsella grandiflora | Brassicales | Brassicaceae | 24 | 3 | 2 | 7 | 12 |
| Capsella rubella | Brassicales | Brassicaceae | 33 | 5 | 2 | 8 | 18 |
| Carica papaya | Brassicales | Caricaceae | 17 | 1 | 4 | 2 | 11 |
| Citrus clementina | 13 | 3 | 5 | 5 | 1 | ||
| Citrus sinensis | Sapindales | Rutaceae | 14 | 1 | 5 | 7 | 1 |
| Cucumis sativus | Cucurbitales | Cucurbitaceae | 13 | 2 | 6 | 4 | 3 |
| Eucalyptus grandis | Myrtales | Myrtaceae | 16 | 2 | 4 | 5 | 5 |
| Eutrema salsugineum | Brassicales | Brassicaceae | 35 | 4 | 2 | 10 | 19 |
| Fragaria vesca | Rosales | Rosaceae | 9 | 1 | 4 | 3 | 1 |
| Glycine max | Fabales | Fabaceae | 23 | 2 | 8 | 11 | 2 |
| Gossypium raimondii | Malvales | Malvaceae | 33 | 0 | 10 | 12 | 11 |
| Linum usitatissimum | Malpighiales | Linaceae | 20 | 0 | 7 | 8 | 5 |
| Malus domestica | Rosales | Rosaceae | 33 | 2 | 14 | 11 | 6 |
| Medicago truncatula | Fabales | Fabaceae | 13 | 0 | 4 | 4 | 5 |
| Mimulus guttatus | Lamiales | Phrymaceae | 17 | 0 | 6 | 5 | 4 |
| Phaseolus vulgaris | Fabales | Fabaceae | 9 | 1 | 4 | 3 | 1 |
| Populus trichocarpa | Malpighiales | Salicaceae | 20 | 2 | 6 | 7 | 5 |
| Prunus persica | Rosales | Rosaceae | 13 | 1 | 5 | 4 | 3 |
| Ricinus communis | Malpighiales | Euphorbiaceae | 18 | 0 | 5 | 4 | 9 |
| Salix purpurea | Malpighiales | Salicaceae | 32 | 4 | 10 | 7 | 11 |
| Solanum lycopersicum | Solanales | Solanaceae | 8 | 1 | 2 | 4 | 1 |
| Solanum tuberosum | Solanales | Solanaceae | 16 | 1 | 5 | 6 | 4 |
| Theobroma cacao | Malvales | Malvaceae | 13 | 0 | 5 | 5 | 3 |
| Vitis vinifera | Vitales | Vitaceae | 4 | 0 | 3 | 1 | 0 |
| MONOCOTS | |||||||
| Ananas comosus | Poales | Bromeliaceae | 14 | 0 | 1 | 10 | 3 |
| Brachypodium distachyon | Poales | Poaceae | 10 | 0 | 0 | 9 | 1 |
| Brachypodium stacei | Poales | Poaceae | 11 | 0 | 0 | 10 | 1 |
| Musa acuminata | Zingiberales | Musaceae | 13 | 7 | 0 | 6 | 0 |
| Oryza sativa | Poales | Poaceae | 14 | 0 | 0 | 13 | 1 |
| Panicum hallii | Poales | Poaceae | 13 | 0 | 0 | 8 | 5 |
| Panicum virgatum | Poales | Poaceae | 31 | 0 | 0 | 22 | 9 |
| Setaria italica | Poales | Poaceae | 15 | 0 | 0 | 9 | 6 |
| Setaria viridis | Poales | Poaceae | 15 | 0 | 0 | 9 | 6 |
| Sorghum bicolor | Poales | Poaceae | 16 | 0 | 0 | 11 | 5 |
| Spirodela polyrhiza | Alismatales | Araceae | 7 | 0 | 1 | 3 | 3 |
| Zea mays | Poales | Poaceae | 20 | 0 | 0 | 15 | 5 |
| Zostera marina | Alismatales | Zosteraceae | 7 | 0 | 2 | 5 | 0 |
| EARLY-DIVERGING ANGIOSPERM | |||||||
| Amborella trichopoda | 9 | 0 | 1 | 5 | 3 | ||
| EARLY-DIVERGING PLANTS | |||||||
| Physcomitrella patens | 2 | 0 | 0 | 2 | 0 | ||
| Selaginella moellendorffii | 1 | 0 | 0 | 1 | 0 | ||
| CHLOROPHYTES | |||||||
| Chlamydomonas reinhardtii | 0 | 0 | 0 | 0 | 0 | ||
| Coccomyxa subellipsoidea C-169 | 0 | 0 | 0 | 0 | 0 | ||
| Micromonas pusilla | 0 | 0 | 0 | 0 | 0 | ||
| Ostreococcus lucimarinus | 0 | 0 | 0 | 0 | 0 | ||
| Volvox carteri | 0 | 0 | 0 | 0 | 0 | ||
The total number of identified RALFs and the number found within each clade are shown.