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. Author manuscript; available in PMC: 2017 Jan 24.
Published in final edited form as: Biochemistry. 2015 Sep 17;54(38):5828–5838. doi: 10.1021/acs.biochem.5b00828

Table 1. Saxis2 values for various residue types in ϕ12 P2.

Domain Residue Apo Mg2+ Mg2+/GMPCPP ts-mutant
Fingers Ile 0.63±0.27 (10) 0.67±0.32 (10) 0.61±0.27 (10) 0.66±0.28 (10)
Leu 0.69±0.30 (22) 0.74±0.29 (22) 0.69±0.29 (21) 0.73±0.32 (21)
Val 0.71±0.32 (20) 0.74±0.33 (22) 0.66±0.32 (19) 0.79±0.31 (21)
Met 0.31±0.18 (6) 0.38±0.23 (7) 0.36±0.23 (7) 0.33±0.17 (6)
Total 58 61 57 58
Thumb Ile 0.72±0.20 (7) 0.72±0.18 (7) 0.68±0.20 (6) 0.76±0.21 (7)
Leu 0.55±0.24 (11) 0.59±0.29 (11) 0.55±0.26 (11) 0.55±0.31 (12)
Val 0.87±0.12 (9) 0.93±0.16 (11) 0.84±0.13 (9) 0.97±0.22 (9)
Met 0.48 (1) 0.60 (1) None None
Total 28 30 26 28
Palm Ile 0.87±0.12 (6) 0.93±0.08 (6) 0.82±0.07 (6) 0.84±0.27 (7)
Leu 0.55±0.29 (15) 0.63±0.26 (14) 0.57±0.27 (15) 0.59±0.28 (14)
Val 0.75±0.29 (11) 0.82±0.31 (14) 0.75±0.28 (15) 0.77±0.32 (12)
Met 0.43±0.18 (4) 0.44±0.18 (5) 0.45±0.17 (5) 0.45±0.18 (5)
Total 36 39 41 38
CTD Ile 0.57±0.43 (2) 0.70±0.57 (2) 0.54±0.39 (2) 0.71±0.59 (2)
Leu None 0.78±0.09 (2) 0.74±0.03 (2) None
Val 0.50±0.38 (3) 0.61±0.36 (4) 0.50±0.36 (3) 0.51±0.36 (4)
Met 0.43 (1) 0.58±0.12 (2) 0.54±0.12 (2) 0.65±0.19 (2)
Total 6 10 9 8
Overalla Ile 0.71±0.24 (26) 0.75±0.26 (26) 0.68±0.22 (25) 0.74±0.27 (27)
Leu 0.60±0.29 (51) 0.67±0.28 (51) 0.61±0.27 (52) 0.63±0.31 (50)
Val 0.72±0.30 (45) 0.78±0.31 (53) 0.70±0.29 (48) 0.78±0.32 (47)
Met 0.37±0.17 (12) 0.44±0.20 (15) 0.42±0.19 (14) 0.42±0.20 (13)
Total 134 145 139 137
a

Total for all Ile, Leu, Val and Met residues including those that do not belong to the canonical domains. Average values and the corresponding standard deviations are calculated over all residues of a particular type in a given structural domain.