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. 2016 Dec 23;10(Suppl 4):112. doi: 10.1186/s12918-016-0351-7

Table 1.

Patch generation thresholds

A The ASA and distance with seed residue of patch residue
Distance(Å) ASA(> Å2)
(2,5) 0
(5,7) 20
(7,9) 40
(9,11) 60
(11,13) 80
(13,15) 100
B Thresholds for patch merging
Domain ASA(Å2) Identity Ratio
(0,5000) 0.8
(5000,7500) 0.7
(7500,10000) 0.6
(10000,+ ∞) 0.5