Table 5.
The comparison of predicting GTP binding sites in the transport proteins between different classifiers
| Feature set | True Positive | False Positive | True Negative | False Negative | Sens | Spec | Acc | MCC | |
|---|---|---|---|---|---|---|---|---|---|
| 5-fold | kNN | 258 | 482 | 8287 | 54 | 82.7 | 94.5 | 94.1 | 0.51 |
| RandomForest | 225 | 420 | 8349 | 87 | 72.1 | 95.2 | 94.4 | 0.48 | |
| LibSVM | 251 | 505 | 8264 | 61 | 80.4 | 94.2 | 93.8 | 0.49 | |
| QuickRBF | 261 | 348 | 8426 | 51 | 83.7 | 96 | 95.6 | 0.58 | |
| Indept | kNN | 49 | 68 | 1641 | 3 | 94.2 | 96 | 96 | 0.61 |
| RandomForest | 40 | 41 | 1668 | 12 | 76.9 | 97.6 | 97 | 0.6 | |
| LibSVM | 43 | 112 | 1597 | 9 | 82.7 | 93.4 | 93.1 | 0.45 | |
| QuickRBF | 49 | 20 | 1690 | 3 | 94.2 | 98.8 | 98.7 | 0.81 |