Table 4.
Classification performance of cross-dataset validation using GGI from PathwayAPI and PPI network
Data | GGI | PPI | ||||
---|---|---|---|---|---|---|
GNFS-greedy [14] | GSNFS-GS | GSNFS-PN | GNFS-greedy [14] | GSNFS-GS | GSNFS-PN | |
Lung1*2 | 0.828 | 0.704 | 0.546 | 0.634 | 0.773 | 0.717 |
Lung1*3 | 0.54 | 0.59 | 0.546 | 0.568 | 0.481 | 0.535 |
Lung1*4 | 0.75 | 0.865 | 0.635 | 0.519 | 0.635 | 0.75 |
Lung2*1 | 0.834 | 0.868 | 0.578 | 0.724 | 0.791 | 0.689 |
Lung2*3 | 0.479 | 0.556 | 0.532 | 0.53 | 0.588 | 0.537 |
Lung2*4 | 0.865 | 0.827 | 0.692 | 0.731 | 0.712 | 0.635 |
Lung3*1 | 0.275 | 0.539 | 0.726 | 0.65 | 0.607 | 0.647 |
Lung3*2 | 0.378 | 0.624 | 0.729 | 0.35 | 0.526 | 0.558 |
Lung3*4 | 0.481 | 0.712 | 0.635 | 0.462 | 0.673 | 0.615 |
Lung4*1 | 0.902 | 0.848 | 0.69 | 0.563 | 0.693 | 0.857 |
Lung4*2 | 0.805 | 0.849 | 0.77 | 0.583 | 0.72 | 0.751 |
Lung4*3 | 0.603 | 0.549 | 0.608 | 0.595 | 0.608 | 0.631 |
The classification performance of the identified subnetworks resulted from different searching strategies in the subnetwork identification