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. 2017 Jan 25;7:41124. doi: 10.1038/srep41124

Table 2. List of high and moderate impact sex associated SNPs identified in the scaffold seq000259.

scaffold position gene ID REF ALT mutation type impact blast_nr description accession_id E-value
430 s00259g14130.t1 C T missense_variant MODERATE No hits found — —
433 s00259g14130.t1 C T missense_variant MODERATE No hits found — —
543 s00259g14130.t1 T C missense_variant MODERATE No hits found — —
9876 s00259g14131.t1 T C missense_variant MODERATE Copper-transporting ATPase RAN1 [Morus notabilis] ref|XP_010087932.1 0
9900 s00259g14131.t1 C T missense_variant MODERATE Copper-transporting ATPase RAN1 [Morus notabilis] ref|XP_010087932.1 0
12314 s00259g14131.t1 C T missense_variant MODERATE Copper-transporting ATPase RAN1 [Morus notabilis] ref|XP_010087932.1 0
12722 s00259g14131.t1 C G missense_variant MODERATE Copper-transporting ATPase RAN1 [Morus notabilis] ref|XP_010087932.1 0
12743 s00259g14131.t1 A G missense_variant MODERATE Copper-transporting ATPase RAN1 [Morus notabilis] ref|XP_010087932.1 0
16247 s00259g14132.t1 C A missense_variant MODERATE No hits found — —
16262 s00259g14132.t1 G A missense_variant MODERATE No hits found — —
16332 s00259g14132.t1 G A missense_variant MODERATE No hits found — —
16431 s00259g14132.t1 G T missense_variant MODERATE No hits found — —
16644 s00259g14132.t1 A G missense_variant MODERATE No hits found — —
33672 s00259g14133.t1 G A missense_variant MODERATE Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus notabilis] ref|XP_010104938.1 5E-31
33676 s00259g14133.t1 C T missense_variant MODERATE Retrovirus-related Pol polyprotein from transposon TNT 1–94 [Morus notabilis] ref|XP_010104938.1 5E-31
33702 s00259g14133.t1 G A missense_variant MODERATE Retrovirus-related Pol polyprotein from transposon TNT 1–94 [Morus notabilis] ref|XP_010104938.1 5E-31
33801 s00259g14133.t1 G C missense_variant MODERATE Retrovirus-related Pol polyprotein from transposon TNT 1–94 [Morus notabilis] ref|XP_010104938.1 5E-31
33951 s00259g14133.t1 A G missense_variant MODERATE Retrovirus-related Pol polyprotein from transposon TNT 1–94 [Morus notabilis] ref|XP_010104938.1 5E-31
36750 s00259g14134.t1 G T missense_variant MODERATE hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
36821 s00259g14134.t1 T C splice_acceptor_variant&intron_variant HIGH hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
36935 s00259g14134.t1 C T missense_variant MODERATE hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
37211 s00259g14134.t1 G A missense_variant MODERATE hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
37307 s00259g14134.t1 C A missense_variant MODERATE hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
38048 s00259g14134.t1 A T missense_variant MODERATE hypothetical protein VITISV_041073 [Vitis vinifera] emb|CAN76196.1 5E-35
39084 s00259g14135.t1 A T missense_variant MODERATE Farnesylcysteine lyase [Morus notabilis] ref|XP_010094602.1 0
39144 s00259g14135.t1 C A missense_variant MODERATE Farnesylcysteine lyase [Morus notabilis] ref|XP_010094602.1 0
41088 s00259g14135.t1 C T missense_variant MODERATE Farnesylcysteine lyase [Morus notabilis] ref|XP_010094602.1 0
45750 s00259g14136.t1 GA G frameshift_variant HIGH No hits found — —
45832 s00259g14136.t1 G A missense_variant MODERATE No hits found — —
45840 s00259g14136.t1 A G missense_variant MODERATE No hits found — —
64179 s00259g14139.t1 A T missense_variant MODERATE pentatricopeptide repeat-containing protein At2g16880-like [Malus domestica] ref|XP_008362682.1 0
65387 s00259g14139.t1 G A missense_variant MODERATE pentatricopeptide repeat-containing protein At2g16880-like [Malus domestica] ref|XP_008362682.1 0
67378 s00259g14140.t1 G A missense_variant MODERATE uncharacterized protein LOC103426396 [Malus domestica] ref|XP_008362712.1 2E-93
68029 s00259g14140.t1 G T missense_variant MODERATE uncharacterized protein LOC103426396 [Malus domestica] ref|XP_008362712.1 2E-93
68033 s00259g14140.t1 C A stop_gained HIGH uncharacterized protein LOC103426396 [Malus domestica] ref|XP_008362712.1 2E-93
68512 s00259g14140.t1 G A missense_variant MODERATE uncharacterized protein LOC103426396 [Malus domestica] ref|XP_008362712.1 2E-93
68583 s00259g14140.t1 G A missense_variant MODERATE uncharacterized protein LOC103426396 [Malus domestica] ref|XP_008362712.1 2E-93
71075 s00259g14141.t1 C T missense_variant MODERATE Putative retroelement polyprotein [Arabidopsis thaliana] gb|AAG10812.1 2E-81
100369 s00259g14144.t1 G T missense_variant MODERATE No hits found — —