Table 5. Computational time of the CyNetSVM app as tested with different network sizes and cross-validation folds.
No. of nodes | No. of edges | Average node degree | Cross-validation folds | Time (sec) |
---|---|---|---|---|
100 | 143 | 2.86 | 5 | 3.1 |
100 | 143 | 2.86 | 10 | 3.7 |
300 | 553 | 3.69 | 5 | 4.5 |
300 | 553 | 3.69 | 10 | 5.4 |
500 | 2162 | 8.65 | 5 | 8.3 |
500 | 2162 | 8.65 | 10 | 9.2 |
1000 | 2181 | 4.36 | 5 | 60.1 |
1000 | 2181 | 4.36 | 10 | 64.3 |
1000 | 3539 | 7.20 | 5 | 60.9 |
1000 | 3539 | 7.20 | 10 | 65.2 |
1000 | 4919 | 9.84 | 5 | 59.7 |
1000 | 4919 | 9.84 | 10 | 64.8 |
2545 | 15094 | 11.86 | 5 | 1856.3 |
2545 | 15094 | 11.86 | 10 | 1874.9 |
5000 | 19207 | 7.68 | 5 | 2980.3 |
5000 | 19207 | 7.68 | 10 | 2998.8 |
9673 | 40563 | 8.39 | 5 | 21653.5 |
9673 | 40563 | 8.39 | 10 | 21706.3 |