Table 3.
Candidate genes of V. algivorus encoding enzymes related to alginate degradation and metabolism
| Assigned gene name | Annotated function of homologous genes of V. splendidus (Wargacki et al. 2012) | DNA similarity to homologous genes of V. splendidus (%) | GenBank/EMBL/DDBJ accession no. |
|---|---|---|---|
| alyB | Alginate lyase | 69 | LC175806 |
| alyD | Alginate lyase | 65 | LC175802 |
| kdgN | Porin | 53 | LC175810 |
| toaA | Symporter | 75 | LC175801 |
| oalA | Oligoalginate lyase | 81 | LC175805 |
| oalB | Oligoalginate lyase | 69 | LC175803 |
| oalC | Oligoalginate lyase | 74 | LC175804 |
| dehR | DEHU reductase | 81 | LC175807 |
DEHU 4-deoxy-l-erythro-5-hexoseulose urinate