Table 4.
The top 36 most statistically significant CpG sites that did not return to never-smoker levels 30 years after smoking cessation in the Framingham Heart Study (N=2,648)
| Probe ID | Chr | Location | Gene Symbol | P |
|---|---|---|---|---|
| cg05951221 | 2 | 233284402 | 3.2 × 10−15 | |
| cg06644428 | 2 | 233284112 | 1.2 × 10−14 | |
| cg05575921 | 5 | 373378 | AHRR | 6.5 × 10−14 |
| cg21566642 | 2 | 233284661 | 8.6 × 10−10 | |
| cg03636183 | 19 | 17000585 | F2RL3 | 5.7 × 10−7 |
| cg06126421 | 6 | 30720080 | 1.3 × 10−6 | |
| cg01940273 | 2 | 233284934 | 1.9 × 10−6 | |
| cg23771366 | 11 | 86510998 | PRSS23 | 3.1 × 10−6 |
| cg17272563 | 6 | 32116548 | PRRT1 | 4.4 × 10−6 |
| cg23916896 | 5 | 368804 | AHRR | 1.3 × 10−5 |
| cg11660018 | 11 | 86510915 | PRSS23 | 1.3 × 10−5 |
| cg08118908 | 16 | 15787920 | NDE1 | 3.0 × 10−5 |
| cg13937905 | 12 | 53612551 | RARG | 1.5 × 10−4 |
| cg24172324 | 2 | 232258363 | 1.7 × 10−4 | |
| cg10780313 | 6 | 33501379 | 2.0 × 10−4 | |
| cg14027333 | 6 | 32116317 | PRRT1 | 2.1 × 10−4 |
| cg11245297 | 19 | 8117898 | CCL25 | 2.1 × 10−4 |
| cg01692968 | 9 | 108005349 | 3.1 × 10−4 | |
| cg00706683 | 2 | 233251030 | ECEL1P2 | 3.4 × 10−4 |
| cg25317941 | 2 | 233351153 | ECEL1 | 4.0 × 10−4 |
| cg25189904 | 1 | 68299493 | GNG12 | 4.0 × 10−4 |
| cg14179389 | 1 | 92947961 | GFI1 | 4.7 × 10−4 |
| cg13641317 | 3 | 127255552 | 4.9 × 10−4 | |
| cg19847577 | 15 | 29213748 | APBA2 | 5.1 × 10−4 |
| cg14239618 | 7 | 110281356 | 5.8 × 10−4 | |
| cg25955180 | 6 | 32116538 | PRRT1 | 6.3 × 10−4 |
| cg00774149 | 3 | 52255721 | TLR9 | 6.4 × 10−4 |
| cg21351392 | 6 | 161607487 | AGPAT4 | 7.1 × 10−4 |
| cg11902777 | 5 | 368843 | AHRR | 7.6 × 10−4 |
| cg07251887 | 17 | 73641809 | LOC100130933; RECQL5 | 7.7 × 10−4 |
| cg19382157 | 7 | 2124566 | MAD1L1 | 8.9 × 10−4 |
| cg19925780 | 1 | 101509557 | 1.1 × 10−3 | |
| cg03679544 | 6 | 155537972 | TIAM2 | 1.1 × 10−3 |
| cg08559712 | 20 | 16030674 | MACROD2 | 1.3 × 10−3 |
| cg09837977 | 7 | 110731201 | LRRN3; IMMP2L | 1.3 × 10−3 |
| cg00931843 | 6 | 155442993 | TIAM2 | 1.4 × 10−3 |
CpG sites without gene names are intergenic. These are all included in all the analyses.