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. 2017 Jan 25;18:106. doi: 10.1186/s12864-017-3486-z

Table 3.

Results of frequency spectrum-based tests to detect selection patterns in coding regions of recombination genes in Z. mays ssp. parviglumis

Gene Length (bp) N Fu & Li D Fu & Li F Tajima’s D
Value Percentile of empirical distributiona
Dmc1 1035 8 −0.72824 −0.70225 −0.16078 69.1
Mlh1 1589 6 0.03616 0.06771 0.12841 78.6
Mre11A 2121 6 1.22721 1.40326 0.97353 96.2
Mre11B 1792 8 −1.20536 −1.33713 −0.80674 37.9
Msh4 2415 8 −1.19426 −1.48169 −1.28039 17.2
Mus81-1 1353 NA NA NA NA NA
Rad51A1 1023 8 −1.68085 −1.83197 −1.06800 26.7
Rad51A2 658 7 0.77544 0.80139 0.33464 85.9
Recq4 3528 9 0.13432 0.02242 −0.27857 64.6
Spo11-1 1158 9 −1.28858 −1.38186 −0.72935 26.5
Spo11-2 854 9 −1.54205 −1.71638 −1.06063 26.7

None of the values indicate statistically significant departure from neutral evolution patterns

a Percentile relative to the genome-wide distribution of Tajima’s D values from a survey of 703 random polymorphic loci in maize and Z. mays ssp. parviglumis [22]