Table 4.
Final SV output set | SV counts | SV covered region (Mb) | ||||||
---|---|---|---|---|---|---|---|---|
SV Set | DEL | INS | INV | DUP | DEL | INS | INV | DUP |
POP_HOL | 4037 | 7679 | 3623 | 2179 | 8.4889 | 0.6334 | 13.8377 | 4.3995 |
POP_JER | 2679 | 0* | 415 | 1191 | 5.2239 | 0.0000* | 1.0497 | 2.3675 |
Overlap between POP_HOL and POP_JER | 1533 | 0 | 69 | 601 | 3.1790 | 0.0000 | 0.2188 | 1.2270 |
TWICE_SEQ | 10,893 | 174 | 200 | 267 | 4.8495 | 0.0077 | 0.3882 | 0.3934 |
FAM_HOL | 4230 | 24 | 106 | 258 | 2.9639 | 0.0012 | 0.2057 | 0.3173 |
FAM_JER | 619 | 0* | 17 | 58 | 0.5944 | 0.0000* | 0.0240 | 0.0466 |
Overlap between FAM_HOL and FAM_JER | 509 | 0 | 14 | 27 | 0.4704 | 0.0000 | 0.0185 | 0.0225 |
* No insertions were found for the Jersey population