Table 1. Sequences of qPCR primers used to investigate the presence of pathogens’ DNA in the E. mucronatus samples. F: forward primer, R: reverse primer, P: qPCR probe.
Target organism | Target gene | Primer’s name | Sequence (5’-3’) |
---|---|---|---|
Bartonella spp. | Intergenic spacer | IT2_F | GGGGCCGTAGCTCAGCTG |
ITS2_R | TGAATATATCTTCTCTTCACAATTTC | ||
ITS2_P | 6FAM-CGATCCCGTCCGGCTCCACCA | ||
Rickettsia spp. | gltA | gltA_F | GTGAATGAAAGATTACACTATTTAT |
gltA_R | GTATCTTAGCAATCATTCTAATAGC | ||
gltA_P | 6FAM-CTATTATGCTTGCGGCTGTCGGTTC | ||
Coxiella burnetii | IS30A | ITS30A_F | CGCTGACCTACAGAAATATGTCC |
ITS30A_R | GGGGTAAGTAAATAATACCTTCTGG | ||
ITS30A_P | 6FAM-CATGAAGCGATTTATCAATACGTGTATGC | ||
Borrelia spp. | 16S | 16S_F | AGCCTTTAAAGCTTCGCTTGTAG |
16S_R | GCCTCCCGTAGGAGTCTGG | ||
16S_P | 6FAM- CCGGCCTGAGAGGGTGAACGG | ||
Anaplasmataceae | 23S | 23S_F | TGACAGCGTACCTTTTGCAT |
23S_R | GTAACAGGTTCGGTCCTCCA | ||
23S_P | 6FAM- GGATTAGACCCGAAACCAAG |