TABLE 1.
GenBank accession no. | Strain name | Length (bp) |
Identical sites |
||
---|---|---|---|---|---|
NGS | Sanger | No. | % | ||
KX162696 | NIE0611195 | 7414 | 7434 | 7411 | 99.96 |
KX162697 | NIE0611432 | 7422 | 7440 | 7422 | 100.00 |
KX162706 | NIE0611579 | 7244 | 7434 | 7132 | 98.50 |
KX162702 | NIE0611523 | 7414 | 7434 | 7406 | 99.90 |
KX162705 | NIE0611535 | 7414 | 7434 | 7414 | 100.00 |
KX162698 | NIE0611449 | 7418 | 7439 | 7418 | 100.00 |
KX162703 | NIE0611531 | 7422 | 7434 | 7417 | 99.90 |
KX162700 | NIE0611517 | 7421 | 7440 | 7320 | 98.60 |
KX162699 | NIE0611452 | 7422 | 7439 | 7421 | 99.99 |
KX162701 | NIE0611522 | 7422 | 7439 | 7417 | 99.90 |
KX162704 | NIE0611534 | 7417 | 7434 | 7416 | 99.99 |
KX162708 | NIE1116622 | 7363 | 906a | 906 | 100.00 |
KX162709 | NIE1116623 | 7076 | 906a | 906 | 100.00 |
KX162682 | CAF2019340 | 7360 | 906a | 906 | 100.00 |
KX162710 | NIE1119343 | 7331 | 903a | 903 | 100.00 |
KX162711 | NIE1119344 | 7357 | 903a | 903 | 100.00 |
KX162707 | NIE1116178 | 7399 | 903a | 903 | 100.00 |
KX162683 | CHA1119341 | 7362 | 906a | 905 | 99.90 |
KX162684 | CHA1218878 | 7541 | 906a | 906 | 100.00 |
KX162685 | CHA1218985 | 7402 | 7441 | 7377 | 99.70 |
KX162690 | CHA1219348 | 7377 | 7442 | 7352 | 99.70 |
KX162686 | CHA1218986 | 7440 | 7442 | 6843 | 92.00 |
KX162687 | CHA1218987 | 7368 | 7443 | 6704 | 91.00 |
KX162688 | CHA1219345 | 7381 | 7373 | 7373 | 99.90 |
KX162689 | CHA1219346 | 7334 | 7450 | 6746 | 92.00 |
KX162678 | CHA1219347 | 7478 | 7403 | 7403 | 99.50 |
KX162679 | CAE1419303 | 7363 | 7444 | 7362 | 99.99 |
KX162680 | CAE1419304 | 7431 | 7444 | 7444 | 99.97 |
KX162681 | CAE1419305 | 7430 | 7444 | 7424 | 99.90 |
KX162692 | EQG1419328 | 7428 | 7442 | 7442 | 99.99 |
KX162693 | EQG1419331 | 7418 | 7442 | 7418 | 100.00 |
KX162695 | EQG1419333 | 7301 | 7320 | 7294 | 99.90 |
KX162691 | EQG1418881 | 7424 | 7442 | 7422 | 99.97 |
KX162713 | NIE1419323 | 7429 | 903a | 903 | 100.00 |
KX162712 | NIE1419321 | 7421 | 903a | 837 | 92.70 |
KX162714 | NIE1519322 | 7440 | 903a | 903 | 100.00 |
KX162715 | NIE1519324 | 6707 | 903a | 903 | 100.00 |
KX162716 | NIE1519325 | 7439 | 903a | 903 | 100.00 |
KX162717 | NIE1519342 | 7398 | 903a | 903 | 100.00 |
VP1.