Table 4.

Molecular_function and Biological_process enrichment analyses for DEGs between different light qualities.

GO domain	GO terms ID	Gene Ontology term	Corrected P-value (<0.05)	UP-regulated DEGs	Down-regulated DEGs	Total DEGs
Molecular_function		W-vs-B
	GO: 0003774	Motor activity	0.00022	12	0	12
	GO: 0004180	Carboxypeptidase activity	0.00178	9	0	9
		W-vs-G
	GO: 0005515	Protein binding	0.00218	50	37	87
	GO: 0005198	Structural molecule activity	0.01232	35	6	41
		W-vs-R
	GO: 0016798	Hydrolase activity, acting on glycosyl bonds	0.00323	24	8	32
	GO: 0016758	Transferase activity, transferring hexosyl groups	0.02418	17	5	22
Biological_process		W-vs-B
	GO: 0034728	Nucleosome organization	0.00187	9	0	9
	GO: 0071824	Protein-DNA complex subunit organization	0.00231	9	0	9
	GO: 0043933	Macromolecular complex subunit organization	0.01025	15	0	15
	GO: 0007017	Microtubule-based process	0.02412	11	0	11
	GO: 0006779	Porphyrin-containing compound biosynthetic process	0.04296	8	0	8
		W-vs-G
	GO: 0034728	Nucleosome organization	0.00501	11	2	13
	GO: 0006457	Protein folding	0.00579	7	0	7
	GO: 0048522	Positive regulation of cellular process	0.00588	3	5	8
	GO: 0071824	Protein-DNA complex subunit organization	0.00674	11	2	13
	GO: 0005982	Starch metabolic process	0.02788	6	3	9
		W-vs-R
	GO: 0044042	Glucan metabolic process	0.01167	12	4	16
	GO: 0034728	Nucleosome organization	0.02295	6	2	8
	GO: 0071824	Protein-DNA complex subunit organization	0.02751	6	2	8