Table 3B.
Frequency of S-cycling genes in metagenomic data as determined by MG-RAST annotation.
| SULFATE REDUCTION | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sample | dsrA | dsrB | dsrk | dsrJ | dsrP | dsrM | dsrE | dsrF | dsrH | ||
| LC 3 | 9.6 | 8.2 | 8.2 | 0.0 | 0.0 | 3.1 | 67.5 | 54.8 | 27.4 | ||
| LC 11 | 47.6 | 25.6 | 4.1 | 0.0 | 0.9 | 0.9 | 56.7 | 72.8 | 36.7 | ||
| HC 3 | 0.0 | 8.8 | 132.8 | 0.0 | 4.8 | 58.4 | 49.6 | 1.6 | 1.6 | ||
| HC 11 | 20.1 | 22.2 | 64.7 | 0.5 | 7.4 | 54.5 | 58.4 | 12.0 | 0.8 | ||
| SULFUR OXIDATION | THIOSULFATE REDUCTION | ||||||||||
| Sample | soxA | soxB | soxX | soxY | soxZ | Rhodanese domain | Thiosulfate sulfotransferase | Thiosulfate reductase | |||
| LC 3 | 15.2 | 0.3 | 2.8 | 3.4 | 42.6 | 987.4 | 314.2 | 87.0 | |||
| LC 11 | 42.6 | 0.0 | 0.0 | 0.0 | 138.9 | 828.8 | 282.0 | 19.7 | |||
| HC 3 | 3.2 | 0.0 | 0.0 | 0.0 | 0.0 | 547.2 | 80.0 | 32.8 | |||
| HC 11 | 18.4 | 0.0 | 0.0 | 0.0 | 2.5 | 71.6 | 23.5 | 7.9 | |||
# hits/106 reads. The numbers of reads annotated with respective gene identifiers (columns) per million metagenomic reads are shown.