Table 1. Cladosporium isolates included in the sequence analysis.
Species | Accession number | GenBank numbers (ITS, EF-1α, ACT) | Substrate | Country | Reference | ||
---|---|---|---|---|---|---|---|
C. cladosporioides | DETSC1A | KT877404 | KT887880 | KT721703 | Puccinia horiana | Mexico | This work |
DETSC1B | KT877405 | KT887881 | KT721704 | Puccinia horiana | Mexico | This work | |
CBS113738 | HM148004 | HM148245 | HM148491 | Grape blossom | USA | [35] | |
CBS143.35 | HM148011 | HM148252 | HM148498 | Pisum sativum | South Africa | [35] | |
CBS674.82; CBS 320.87 |
HM148014 | HM148255 | HM148501 | Gossypium seeds | Israel | [35] | |
CBS11398 | HM148024 | HM148265 | HM148511 | Phragmidium griseum on Rubus crataegifolius | South Korea | [35] | |
CPC12762 | HM148030 | HM148271 | HM148517 | Spinacia oleracea seeds | USA | [35] | |
CPC12852 | HM148033 | HM148274 | HM148520 | Eucalyptus sp. | Australia | [35] | |
CPC14705 | HM148050 | HM148291 | HM148537 | Phyllactinia sp. Chaesmothecia on Fraxinus rhynchophylla | South Korea | [35] | |
CPC13220 | HM148054 | HM148296 | HM148541 | Lychen on Acer platanoides | Germany | [35] | |
CPC14238 | HM148055 | HM148297 | HM148542 | Sambucus nigra fruits | Netherlands | [35] | |
CBS306.84 | HM148057 | HM148299 | HM148544 | Puccinia allii | UK | [35] | |
CPC13867 | HM148059 | HM148301 | HM148546 | Leptosphaeria sp. | South Africa | [35] | |
CBS113746 | HM148061 | HM148303 | HM148548 | Cherry fruits | USA | [35] | |
CPC13362 | HM148063 | HM148305 | HM148550 | Paeonia obovata | Germany | [35] | |
CBS1123881 | HM148003 | HM148244 | HM148490 | Indoor air | Germany | [18,35] | |
C. pseudocladosporioides | DETSC03 | KT877407 | KT887883 | KT887879 | Puccinia horiana | Mexico | This work |
CBS117134 | HM148156 | HM148400 | HM148645 | Cloud | - | [35] | |
CBS117153 | HM148157 | HM148401 | HM148646 | Paeonia sp. leaves | Germany | [35] | |
CBS 1259932 | HM148158 | HM148402 | HM148647 | Outdoor air | Netherlands | [18,35] | |
CBS 176.82 | HM148162 | HM148406 | HM148651 | Pteridium aquilinum | Romania | [35] | |
CBS 574.78A | HM148163 | HM148407 | HM148652 | Melampsoporidium betulae | Russia | [35] | |
CBS 574.78B | HM148164 | HM148408 | HM148653 | Melampsoporidium betulae | Russia | [35] | |
CPC 11392 | HM148166 | HM148410 | HM148655 | Chrysanthemum coronarium var. spatiosum | South Korea | [35] | |
CPC 11841 | HM148168 | HM148412 | HM148657 | Phalaris aquatica leaves | New Zeland | [35] | |
CPC 12850 | HM148169 | HM148413 | HM148658 | Rotten wood | USA | [35] | |
CPC 13488 | HM148171 | HM148415 | HM148660 | Vernonia sp. | Brazil | [35] | |
CPC 14295 | HM148188 | HM148432 | HM148677 | Soil | Chile | [35] | |
CPC 14357 | HM148189 | HM148433 | HM148678 | Food, Coffee leaves | Uganda | [35] | |
CPC 14992 | HM148192 | HM148436 | HM148681 | Eucalyptus sp. | Indonesia | [35] | |
CPC 13992 | HM148174 | HM148418 | HM148663 | Coffee tree | USA | [35] | |
C. delicatulum | DETSC02 | KT877406 | KT887882 | KT887878 | Puccinia horiana | Mexico | This work |
CBS 126344; CPC 113893 |
HM148081 | HM148325 | HM148570 | Tilia cordata | Germany | [18,35] | |
C. sphaerospermum | CBS193.54 | DQ780343 | EU570261 | EU570269 | - | - | [39] |
C. herbarum | CBS 121621; CPC 12177 |
EF679363 | EF679440 | EF679516 | - | - | [31] |
C. tenuissimum | CBS125995; CPC14253 |
HM148197 | HM148442 | HM148687 | - | - | [18] |
Cercospora beticola | CBS116456 | AY840527 | AY840494 | AY840458 | - | - | [18,35] |
ACT: partial actin gene, EFα1: partial translation elongation 1-α gene, ITS: internal transcribed spacer with 5.8 rRNA gene.
1 Ex-type from neotype;
2 Ex-type from holotype;
3 Reference strain