Fig 3. Recovery of loci in DNA sequences.

(a) The fraction of expected genomic fragments recovered in a single representative replicate (index 1, tag 1) of unamplified adult worm DNA is shown for each fragment size at different coverage depths. All eight replicates produced similar results (S2 Fig). (b) The fraction of expected genomic fragments recovered in a single sample (index 1, tag 1, miracidia 5) of amplified miracidia is shown for each fragment size up to 600bp at different coverage depths. S3 Fig displays results for all eight samples.