Table 1.
Name of the specie | MW (Da) | pI | Cleavage site | Description of the digestion product | Tag |
---|---|---|---|---|---|
desoctaNGF−YBBR-2 C-Term | 13202.8 | 8.27 | R +9; L +128 | Without the first 9 aa at the N-terminus and 2 aa at the C-terminus | Yes |
NGF−YBBR -2 C-Term | 14252.6 | 8.56 | R −1; L +128 | Without 2 aa at the C-terminus | Yes |
NGF−Tag YBBR | 13261.3 | 8.81 | R −1; R +118 | Without 11 aa at the C-terminus | No |
NGF−YBBR +R N-Term; -2 C-Term | 14408.4 | 8.8 | K −2; L +128 | Plus the arginine at the N-terminus and without 2 aa at the C-terminus | Yes |
NGF+R N-Term -Tag YBBR | 13417.1 | 9.0 | K −2; R +118 | Plus the arginine at the N-terminus and without 11 aa at the C-terminus | No |
The first reported specie, lacking the first 9 amino acids, is here termed “DesoctaNGF” because it resembles the naturally occurring desocta form reported for murine NGF (Fahnestock, 1991). The other species are characterized by the lack of two amino acids or of the entire YBBR tag at the C-terminus (-2 C-Term or -Tag YBBR). The species that contains the arginine at the N-Terminus are also shown (+R N-Term). The second and third columns show the molecular weights (Dalton) and the theoretical isoelectric point of the digested species. The amino acids numeration adopted is in accordance to the literature (Paoletti et al., 2009).